Pseudomonas aeruginosa AZPAE14693, NQ90_RS16390

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas aeruginosa strain AZPAE14693 AZPAE14693_contig_19, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCTCTTCAGCGGTGCCGGAGCGGAACTGTTCGAGCTGTCCCTGGTGGATTTCGCCGGCAACGGCGCGCGCCTGGCGCACAACCGCAAGCTGCTGGAAACG GTGCTCGGGTCGATGGATGCCCTCAGCAGCCGGGTGAGCTGGACCGACACCCTGAAGAGCAAGATCCTGCTCGGCGTCTGGGGCGAGTTTCCCGCCCTCG ACCGCCACTACCTGGCCGCCTGTCGCGCGCTGTATCCACGCCGGGGCCTGACGAGCGTCAACGGCGGGACCCTCACCGCGCTGCACCGCCTGATCGGCGA AGAAAGGCTGTCGTTCCCGCGCCTGGAGACCGCCCGCAAGGGGCTCCTCTACCCCACCGGGCGCCTGGCCGACATGGCTTTCTTCCAGTACGGCCTGGAA AACGCCTGAGGCGCTGCGCCGCCGATCCGGGGGACTTGTAGGCATGCCCTCGCTGTAAGTAGTATGAGACTCATTCTCAATTACAACAGCGATCCCCTCC
DNA Sequence for Gene
>NQ90_RS16390
ATGCCGCCGGCCGACGCCTCCCTGCACGACGCTGTGAGCCATCTCTACCAGGACCACCATGGCTGGCTGCAAGGCTGGTTGCGGCGACGCCTGGGCTGCG CGGAAAACGCCGCCGACCTGGCCCAGGACACCTTCGCCCGCCTGCTCGCCTCGCGCCGGGTACTGGATGCGCGCGAACCGCGCGCCTACCTGACCACCGT CGCCAAGGGGCTGATGATCAACTGGTTCCAGCGCCAGTCGCTGGAGCGCGCCTACCTCGATGCCCTGGCCAACCTCCCGGAAGACCTCGCGCCGCCGCCG GAACAGCGGTTGATGGTGCTGGAAACCCTGCATGAAGTAGACGCCCTGCTCGGCAGCCTGCCGGACAGGGTCCGCCAGGCGTTTCTCCTGGCGCAGATCG AAGGCCTGAAGTACGAAGCCATCGCCGAGCGCCTGGGCGTGTCCCTGGGCTCGGTCAAACGCTACATGCAGCAGGCCTTCCGCCAGTGCCTGGAGCTGAT GGAATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ATTCCGCGGGCGAAGGCCGGATTCCCTCGCCGATCCTCGACGAGGCCGCCGAGTGGCTGGTGCGCCTGCAGGACAGCGGCTGCACCGACGACACGCGCCA GGCGTGCGCCCAGTGGCGGCAGCGCAGCCCACAGCACGCCCATGCCTGGGAGCGCGCCGAGCGCCTGCTGCAATGCCTCGGCCGACTGCCGCCGGCGCTG GCCCTGCCGACCCTCGGCCGCGAGCGCGGGCTGGACCGGCGGCGCGCGATCAAGCACCTCGCCCTGGTCCTCGGCGGCGCCTCGCTGGGGCTCGCCACCT GGCAGGCCGAGCCGTTGCGCGACTGGCTGGCCGACCAGCGCACCGGCGTCGGCGAACAGCGCCGCCTGACCCTGCCCGACGGCAGCCTGCTGACCCTGAA CACCGACAGCGCCGTGGACCTGGCCTTCGACGCCAGCCAGCGGCTGGTACGCCTGCTGCGCGGCGAGATCTTCGTCGATAGCCGCGCCGACCCGCGTCCG
Amino Acid Sequence
>RNA polymerase sigma factor
MPPADASLHDAVSHLYQDHHGWLQGWLRRRLGCAENAADLAQDTFARLLASRRVLDAREPRAYLTTVAKGLMINWFQRQSLERAYLDALANLPEDLAPPP EQRLMVLETLHEVDALLGSLPDRVRQAFLLAQIEGLKYEAIAERLGVSLGSVKRYMQQAFRQCLELME
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site