Strain | Pseudomonas aeruginosa strain AZPAE14693 AZPAE14693_contig_13, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
ACGAAACCTACCTGAGAGTCGACCGGCTGGATGATGCCCTGGAGGTCAAGAAGCCCCAGGCCTACCTGTTCCGCATTGCCCTGAACATTGCCGCCGACCG CCGCGAGGGCGACGCCCGCCTGCTCACCGGGGAGGAGGTGGCGGAACTGTTGCAGGTGGCCGACGAAGGCCTCGACCCGGAGCGCATCGTCGGCGGTCAT GCCGAGATCCGTCGCCTGCTGGAGGCGCTCTGCGAACTGCCGGCGCGGCGCCGGCAGATTCTCATCGCCTCGCGCCTGGAGGAGACGCCGCATGCGGAAA TCTCCCGTCGCTTCGGCATTTCCACCCGCACCGTGGAGAAGGAACTCAAGGCCGCCCTGTGGTTCTGCGCGGAGCGCCTGGAAAGAAAAGTCATCCAGAG GTTCGGTCCCGGGGCCGGAAAACCGTCATAAGCATAAGCAGGTGGAAAACCGCCGCCATATCCATCCCATGAGCCATTCCGGTGTCCGTACAGCACAGTC
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DNA Sequence for Gene |
>NQ90_RS12150
ATGACAGCCTCAGACTCCGCCGCCGATGAAACCGGCGACCTTCGCCACGAAGCGCACGCCTGGGTGATCAGCCTGACCTCCGGACGCGTCACCCAGGGCG ACGCGCGGGCCTTCCGCCAGTGGTGTGCGCGCAGCCCGCAACACCTGCGAGCGTTCGTCGAGGCGCGCGATCTCTGGCAGGCACTCGGCAGTGCCGCCGC TCTGCCGCTGGAGCCGCCGGCCGTGGCGCAGATCGCGCCGAGGCGTTTCGGTCGTCGCTGGTTCGTCGGCGGTGCGCTGGCCGCCTCGGTGGCGTTGTTC GTCTTGCGCCCGTCGCTGCTCGACCATGGCCTGGGCGGCGCCGACTATGTCACGGCGGTCGGCGAGCAACGCCAGGTGCAGGTGAGCGGCGAGACGCGGA TCGAGATGAACACCCGCACCCGCCTGAACGTGCGGCGCAATCAAGAGCAGCAGGAAACCATCGAACTGCTCGGCGGCGAGGCCGAGATCATCGCCAGCCA CCCGCCGCAGAGCAGCCTGCGGGTGATGGCCGGGAGCGCCTGGCTGAGCGCCAGCCGGGCCCGCTTCAATGTGCGCAGCAGCGGTGACGTTTGCGTGGTG ACTTGCCTGGAGGGCAGCGTGCGGCTCGAACACCTCGGTCAGCGCCTGGACCTCCAGGCCGGCCAGCAGCTGACCTTCGACGAGCGACGCAACGGTCCGC CGGTGCCTTTCGACGTTGCCGAGGTGATGGCCTGGCGCGAGCGCATGCTGGTGTTCAACGACGTACCGTTGGCCACGGTGATCGACGAAATCAACCGCTA CCGTCCCGGCATGCTCCTGCTGCTGGACAAGGCCCTTGGCCGACGCCGGGTCCAGGCCCGTTTCAGCCTCGATCAACTGGCCGACGTGGCGACCCTGATC CGCGATGCCTATGGCATCGAGGTCACCCGCCTGCCGGGCGGGGTGGTGCTGCTCGGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCCACCGCTTCATTGCAGGGCCACCACCCGTCGATAGCGCTCCACGCCGTTGCGGGTGACCCGCGCCAGGCTGATCTCCAGTCCGCTGGCGCGGACTTTG CTGCGTGCCGGCAGGCGCGTCCAGCCCTTTCCCGGCACCCAGGCACGGATCTCGAACCGACTCACGTCGTCCAGCACAGCCACCCGCTCCGCCAGCGGCG GCAACGGCAGGCGGTCGCCGCTGGGCGAGGCGGCGCGGTAGAGGATCTTGCCCTGTCGCCACCAGCGCACGCGCTGCAGCGGCGCGCCTGGCTCGGTACT GGCGCGGACGATGTCCAGGCGCAATGGGATCTCGCTCAGGCGCTTCAGTGCGAGTCCGGGCGGCAGGCTGTCGCCGGCCCGGATCGGCTCGTCGCCGCTG GGCAGGCCGGACTCCTCCCGGATGGCGCTGTGCAGGGCGATGTCGCGCTCCAGTTGGTTCAGCGCGCGCAGTAGCGCGGCGCCCTGCTCGGTGCTGTCCT
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Amino Acid Sequence |
>iron dicitrate transporter FecR
MTASDSAADETGDLRHEAHAWVISLTSGRVTQGDARAFRQWCARSPQHLRAFVEARDLWQALGSAAALPLEPPAVAQIAPRRFGRRWFVGGALAASVALF VLRPSLLDHGLGGADYVTAVGEQRQVQVSGETRIEMNTRTRLNVRRNQEQQETIELLGGEAEIIASHPPQSSLRVMAGSAWLSASRARFNVRSSGDVCVV TCLEGSVRLEHLGQRLDLQAGQQLTFDERRNGPPVPFDVAEVMAWRERMLVFNDVPLATVIDEINRYRPGMLLLLDKALGRRRVQARFSLDQLADVATLI RDAYGIEVTRLPGGVVLLG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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