Pseudomonas stutzeri RCH2, Psest_4245

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas stutzeri RCH2 chromosome, complete genome. [Details]
DNA Sequence Upstream of Gene
AAGCGCCCGCGCCTGGATGGCCGTTACCAGCACAGCGACCAGGGCGCGAGCTTCCGCAAGCTGATGGACGCGATTCGCCAGGTGTTGTCGATGGTGCTCG AACAGCATGCCATCGAGCTGCTGCTGCAGCAGCGTCAGTACGGCATCCAGGTATCGCCGCTGCATGACCACAAGCTGCTCGGCACGGCGTCTTTCGTGCT CGCCGCCAGCGCCCAGTGCGACTCGGAAACCCTGCGCACGCGGCTGCCGGCGCACCTGAAGATCGGCCCGGTGGAGCGTATCCGCCAGCTGGTCAACCTG CATCTGCCGGGCATCCGCCTCAAGCCGCTGCCGGTGGCGCCGCGGCAAATCCCCTTCCATGCCGGCAAAACCTATTTCGCCCTGGAGCTCAGCGCCGAGG ACCAGGCGCAGCTGGAGCGCTCCGGCGGCTTTGCCTTCCATGTGTCCGGTGACTTCACCGGGCTCGAACTGAAATTCTGGGCGGTCAGGGACTGAGCGAC
DNA Sequence for Gene
>Psest_4245
ATGATCAAGGAAATGGATTACGGACAGGACGACCGCACGGTCATCGTCAATCGAGCGGGAGAGACCCCGGCGCAGAGCCCGCTGACCGACTTCGACACCC CGCCGCGCTTCGAGCAGCTGGAGGAGCGGATGATCTACGCCGCGCGTCTGCGCCCGGCGGAAACCTTCAACATCAGCCTCAATCCGCTGGTAGCTGCCGC CTCGCCGCTGCTGTCGGAAGTGGTGCGCTTCAAGCACAGCCTGGAAAGCGAAGACTTGCAGGCCCTGCATGGCCAGTTGAGCAGCGCGATCAAGCTGTTC GAACATCGCGCGCTGCATGACGGCGCCGAAAGCAGCCAGGTGATGGCGGCGCGCTACGTGCTCTGCACCGTGCTCGACGAGGCCGTGGTAACCACGCCCT GGGGCAACGAGAGCGAATGGTCGCAGATGAGCCTGCTGTCCTCCTTCCACAACGAGACCTTCGGCGGCGAGAAGTTCTTCCAGCTGCTCGAGCGGCTGTC GCGCAACCCGGTCAAGCACCTGCCGATGCTCGAGCTGATGTACCTCTGCCTGTCCCTCGGCTTCGAGGGCAAGTACCGCGTGCTGCCGCGCGGCATGCTC GAACTGGAGGCCGTGCGCGACAGCCTCTACCGGCAGATCCGCCAGATGCGTGGCGACATCCCGCGCGAGCTTTCGCCGCACTGGGAAGGCCTCAAGGACA CCCGCCGGCGCCTGGTGCGCATCGTGCCCTGGTGGATGGTCGCGCTGTTCACCCTGATGTGCCTCGGGGTGATCTACGGCGGTTTCGCCTGGGTGCTGGG CGAACAACGCGAGAGCGTGCTGCAACCCTATCGCTCGCTGGACATGGATGCCGGCGATTCCACCTTTTCAGGGATGAGATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
AATGAAGACGTTCTTTGGCAAGCTCGGCGCCGTACTGCGCCGGACCTGGGTCTGGAGCCTGCTGCTGGTCCTGCTGCTGGCAGTCGTGGTGTGGTTCGTC GGGCCGCTGCTGGCGGTCGACGACTACCGCTTCTGGGAAGCGTCGACCGCACGCCTGCTGAGCATCAGCGTGCTGTTTCTCGGCTGGGGCCTGGCCATGG TCTTCACCAGCTGGCGCGCCAGCGCGCGCAGGAAGCGCGACGCGGAAGACCAGGACGTTCAGGAGCAGCTGCGCCGCGACGGCCTGATCGGCGAAGAGCA ACAGGAGTTGCGCCATCGTTTCAAGCAGGCGCTACGCACCCTGAAGACCTCCAGCCTCTATCGCGGGCGCAGCGAGAAATGGCGCAGCGAGCTGCCCTGG TACCTGTTGATCGGTCCGCAGGGCAGCGGCAAGACCAGCCTGCTGGACTTCTCCGGGCTGGATTTCCCACTCAACCGCAGCGAACAGCAGCGCCTGACCA
Amino Acid Sequence
>DotU family type IV / VI secretion system protein
MIKEMDYGQDDRTVIVNRAGETPAQSPLTDFDTPPRFEQLEERMIYAARLRPAETFNISLNPLVAAASPLLSEVVRFKHSLESEDLQALHGQLSSAIKLF EHRALHDGAESSQVMAARYVLCTVLDEAVVTTPWGNESEWSQMSLLSSFHNETFGGEKFFQLLERLSRNPVKHLPMLELMYLCLSLGFEGKYRVLPRGML ELEAVRDSLYRQIRQMRGDIPRELSPHWEGLKDTRRRLVRIVPWWMVALFTLMCLGVIYGGFAWVLGEQRESVLQPYRSLDMDAGDSTFSGMR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site