Pseudomonas stutzeri RCH2, Psest_4242

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas stutzeri RCH2 chromosome, complete genome. [Details]
DNA Sequence Upstream of Gene
GGCAGGGGTCGTGGGTTCGAATCCCGCCGGATGCGCCATATATAGTCGTTTCGAGTGCCGCTCGAAGCGCTCCGCAAAAGCCCGCTCGCTGCGGGCTTTT GCGTTTCTGCAGGTCCGTCAGCGATCAGCAGATCACCTGCCAGCAACGATCGGCCGGCGCAAGGCAAACCTGCCGCGCGACGTCACCGAGCCGCCTCAAC CTGACCTCACGCTCGTTTTAGACGCATCCGTCGGGTGTTCTGTGAACCCGTTCACCGAGCCTGCACGACAACTGAACTTCAATGCCTCGCTCAGGTCGCG CCATGCGCACCTTGCCCCCACACACGACTTCAAGGAGGAAATCGCGTGCCCGTGCGCTATTACGCCCTCGTTTCGCTCATCGCCGCCGCGCTGCTCGCCG GTTGCACCGGCAACTACAAATTCGACGATGACCACTATCGCCCGCTGGGTGATCCGCAAGCCTTGAATCGCGGCAAGTAACCGCAAGGAGCGACACGACC
DNA Sequence for Gene
>Psest_4242
ATGGAACTGGTCTTCGATATGGTGGGCGCCCAGCAATTCGTGCCCGGGCTGCTGACCACCAAAACCTTCAAGCAGGCCGGCGGCGTGATCGGCCGGGCCG AAGGCTGCGATTGGGTGATCCCCGACCGCAAGCGCGTCCTCTCCGGGCGTCACGCGGTGATCAGCTACCGCGACGGCGGCTTCTTTCTCACCGATACCAG CAGTAACGGCATCCAGCTCAAGGACAGCGGTGCCAGCCTGGTCAAGGGCCAGCCGCAGCGCATCGAGCATGGCAGCGTCTATTGCCTGGGCGACTTCGAG ATCCGCGCCCGGCTGATCCAGGACCCGGCGCTGTTCGAAGGCGACATCGGCCGCCCGCAACCTGCCGGCACCATCATTCCCGACGATGCCTTCCTCGACC TCGATCCACTGGTCGCGATGGATCAGCAGGAGCGCATCTATGCCGAAGTCGACGACCTCGACCTGACGCTGGTGGCACCGCAACGCCAGGCCCAGCAGCG CGACTACGCCCGCATCGACACCGAAAGCCTGCCGCTGCCGGAGCTGGTCATGCCGCAGGTGGCAACCGAACCCAAGCGCGAACCGGAGCCCGAACGCCTG CCTCCCGGCTTCTGGCAGCGCTTCGGCGACGCGCTGGGTGTCGATCTCAAGGATATGGACGAGGACCAGCGTCAGGCGCTGGCACTGAATGCCGCGCGCC TGCTCAAGCAGAGCATCGGCGGTTTGCAGCAGAGCCTGCGCACCCGTAGCGAGCTGAAGAACGAGCTGCGCCTGGCACTGACCACCGTACAGAGCGCCGG CAACAACCCGCTCAAGCACAGCGCCGATACTGGCGAGGCCATGAGCGCCCTGCTGCGCGGTGGCAAGCCTGGCCAGCTCACGGCCGAGCAGGCCGTCGGT CGCGCCTTCCGCGACCTGCAGGCGCATCAGGTGGCACTGCTGGCCGCCAGCCGCGCAGCGGTGCAGGCGATGTTCGAACAACTGGCCCCGGAGCAGCTGG CGCTGCGTTTCGAACGCGAAGGCCGCAAACCGCTGCTCGCCACCGCCGGCAGTCGCTGGCGCGCCTATCGCCGGCTGCATCACAGCCTCGGCCAGGACGC CGACTGGAGCGAACGGCTGTTCGCCCGCGATTTCGCCAAGACCTATGAGGAGCAGGTGCGCCTGATCGCCACGCTCGATTCCACCCATCAAGGATGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCCCATGCCTCGTCGCATCACCCTGGCCATGCTGGCCTCGCTGCTCGTGCTGGGCGGCTGCTCGGCGCTGTCGCCGTACTCCAAGCTGACCAAGCTGGAT CTCGAACTGCACGGCAGCGACCGTCTCAATCCCGACCTCAACGGCCGACCGTCGCCGATCGTGCTGCGCCTGCTGGAGCTCAAGCATCCGGTGGCGTTCG AGAGCGGCGACTTCTTCGCCCTCTACCAGCGGCCCAAGGAAGCCCTGGCGCCGGACCTGGTGACCTCCGAGGAACTGGAACTGCGTCCCGGCGAGAGCCG CGAGCTGAAGCTGTCGGTGCAGGACGGCAGTCGCTACGTCGGCGTGCTGGCCGCCTACCGCGACCTGCCGGAAGCCAGCTGGCGCTACGTCATCGCCGTG CCGCCGCAAGAGCGCACCCGCGTCGCCCTGAGCCTGGATGAGCGCGGCATCGCGCTGTTCGACCCGCTCGCCGAAGAAGGAAAATAAGCATGAGCCTGCA
Amino Acid Sequence
>type VI secretion system FHA domain-containing protein
MELVFDMVGAQQFVPGLLTTKTFKQAGGVIGRAEGCDWVIPDRKRVLSGRHAVISYRDGGFFLTDTSSNGIQLKDSGASLVKGQPQRIEHGSVYCLGDFE IRARLIQDPALFEGDIGRPQPAGTIIPDDAFLDLDPLVAMDQQERIYAEVDDLDLTLVAPQRQAQQRDYARIDTESLPLPELVMPQVATEPKREPEPERL PPGFWQRFGDALGVDLKDMDEDQRQALALNAARLLKQSIGGLQQSLRTRSELKNELRLALTTVQSAGNNPLKHSADTGEAMSALLRGGKPGQLTAEQAVG RAFRDLQAHQVALLAASRAAVQAMFEQLAPEQLALRFEREGRKPLLATAGSRWRAYRRLHHSLGQDADWSERLFARDFAKTYEEQVRLIATLDSTHQG
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site