Pseudomonas stutzeri RCH2, Psest_3166

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas stutzeri RCH2
GCF_000327065.1|latest
Locus Tag
Psest_3166
Name
Replicon chromosome
Genomic location 3338854 - 3340287 (+ strand)

Cross-References

RefSeq YP_007241291.1
GI 431928257
Entrez 14301015
INSDC AGA87661.1
NCBI Locus Tag Psest_3166
UniParc UPI0002A18EBA
UniProtKB Acc L0GNS6
UniProtKB ID L0GNS6_PSEST
UniRef100 UniRef100_L0GNS6
UniRef50 UniRef50_A6V0P4
UniRef90 UniRef90_A4VIS1

Product

Feature Type CDS
Coding Frame 1
Product Name
DNA/RNA helicase
Synonyms
Evidence for Translation
Charge (pH 7) -3.66
Kyte-Doolittle Hydrophobicity Value -0.360
Molecular Weight (kDa) 52719.7
Isoelectric Point (pI) 6.37

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 620 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001808 (534 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psest_3166
Search term: DNA/RNA helicase

Human Homologs

Ensembl 110, assembly GRCh38.p14
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value: 8.7e-54
Percent Identity: 38.3
Ensembl 110, assembly GRCh38.p14
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value: 8.7e-54
Percent Identity: 38.3
Ensembl 110, assembly GRCh38.p14
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value: 8.7e-54
Percent Identity: 38.3
Ensembl 110, assembly GRCh38.p14
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value: 8.7e-54
Percent Identity: 38.3
Ensembl 110, assembly GRCh38.p14
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value: 8.7e-54
Percent Identity: 38.3
Ensembl 110, assembly GRCh38.p14
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value: 8.7e-54
Percent Identity: 38.3
Ensembl 110, assembly GRCh38.p14
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value: 8.7e-54
Percent Identity: 38.3
Ensembl 110, assembly GRCh38.p14
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value: 8.7e-54
Percent Identity: 38.3
Ensembl 110, assembly GRCh38.p14
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value: 8.7e-54
Percent Identity: 38.3
Ensembl 110, assembly GRCh38.p14
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value: 8.7e-54
Percent Identity: 38.3
Ensembl 110, assembly GRCh38.p14
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value: 8.7e-54
Percent Identity: 38.3
Ensembl 110, assembly GRCh38.p14
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value: 8.7e-54
Percent Identity: 38.3
Ensembl 110, assembly GRCh38.p14
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value: 8.7e-54
Percent Identity: 38.3
Ensembl 110, assembly GRCh38.p14
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value: 8.7e-54
Percent Identity: 38.3
Ensembl 110, assembly GRCh38.p14
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value: 8.7e-54
Percent Identity: 38.3
Ensembl 110, assembly GRCh38.p14
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value: 8.7e-54
Percent Identity: 38.3
Ensembl 110, assembly GRCh38.p14
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value: 8.7e-54
Percent Identity: 38.3
Ensembl 110, assembly GRCh38.p14
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value: 8.7e-54
Percent Identity: 38.3
Ensembl 110, assembly GRCh38.p14
DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745]
E-value: 8.7e-54
Percent Identity: 38.3

References

No references are associated with this feature.