Pseudomonas stutzeri RCH2, Psest_2893
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri RCH2 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CTCGGTTGAAGTGTCGAGTCCGGCGAGACGCTCCTGATACCAGGCCTGGGTCGATAGCAGATGCTCGGGCGTTTGCAGCAAAGCGGCCATCAGACTTGCC GCCTTGGCGTGGGACGCGGTATCCGAGGTACGAGTCGCCTCCACATGGGCACGCACCGCGGTCAGCGGATCGGGCTGGTCGCCGGCGATGCGCTGGAACT GCTCCGTATAACCCTTACCCCAACGCTCGAACATGGCGTTGATCAGGTCATCCTTGCTGCCGAAGCTGTACTGCACCCCACCCTTGGTAATGCCGGCGGC CTTGGCCACCGCATCGATCGTCAGCGCTGCAGCGCCCTGTCGATTGACGATCCCTTCGGCCACGTCCAGCAGCGCATCGCGATCGATCGTTCTCTTCCTT CCCATAAGCGCCCCTTTCAATTAAATACGTATGTATTTATATTTTGCCGCAACGTTCATATTCAGCCAACAGCGATGCACATCCAGACCGAGGCTCGCCC
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| DNA Sequence for Gene |
>Psest_2893
GTGAAATCGTCTCTTCGCTGGCTGGTGCTGGGCATACTGTCCAGCGCCCTCCTGCTGATCGTCATCGACATGACGGTGATCTACCTGGCTCTGCCCAGCC TGACCTACGAGCTGCGTGCTTCCGCCACCGAAAAGCTGTGGATCGTGAACGCCTATGCCCTCACCGTTGCGGGCCTGCTGCCCGGTATGGGCGCGCTGGG CGATCGTTTCGGTCACAAGCGGATGTTCATCTCCGGTCTTGTGGTGTTCGGCTGGGCATCCCTCGGCGCGGCGTTCTCACCGACGCCCGAGATACTGATT GCCGCCCGTGTTGCGTTAGCCGTAGGCGCGGCCATGATGATGCCCGCAACCCTGGCGATCATCCGTCACGTGTTCGAAGACACGCGCGAACGCGCCCTGG CGTTCGGCATCTGGGCCGCTATCGCTTCGGGTGGCGCGGCGTTCGGTCCGGTGGTCGGCGGCGTGCTGCTGGAACATTTCTGGTGGGGTTCGGTGTTCAT CATCAACGTACCCATCGTCCTGCTCGCACTGGTACTCGCGGTGATCTGGGTGCCGTCCAGACCCGGCAACCCGCAACGGCCTTTCGACCTGCTCGCTTCG CTGTGGGTCATGGGCGCGCTGGTTGGGCTGACGCTGGCAATCAAGGAGGCCGGCAAGGCGGACCCTTCCCTGCTGCAAGCCAGCGTGGCGGCATGCACAG CGGTCGTTTGCGCCCTGGCCTTCCTGCGCCGTCAGCGCCAGACCGCCGTACCGATGATCGATTTCACGCTATTCCGCGATCGAAGCTTCTCGGCAGGCGT GATCACTGCGTCGGTTGCCTCCGCCGCCTTGATGGGCATGGAGCTAGTGGTCAGCCAGCGGCTGCAGCTGGTGGTTGGCCTGTCGCCGCTGCAGGCTGGC CTGACCATTCTGCCGATTCCGCTCGGCGCCTTTATCGTAGGACCGCTTGCTGGGCTGGCGCTGCCGCGTATCGGCGCGGAGCGGATCCTCAGTACCTCAC TGGCCCTGTCGGCAGCCGGCGCCCTGCTCTATTTGCTGGGCTACGCGGGCGAGCAATGGCTGCAGATCCTATCGTTCAGCCTGCTCGGGTTTGGTGTCGG CGCGGCGATGACCGCCGCCTCCAGCGCCATGCTGCTGCAAGCCCCAGCGGATCGAGCGGGCATGGCCGCATCGATTGAAGAAGTGTCGTACGAGCTCGGG GGTGCGCTAGGCATCGCCATCCTCGGCAGCCTGATGTCCGCGGTTTACGCTGCAGCCATCGTCACGCCGGGCACGATGGCGCTCCCCGACCTGGCACTCG ACAGCCTCGATGGCGCCCTGATCGCCGCAGAAGCGTTGCCCGAAGCCATCGCGGCCCCGCTGATCAGCCTGGCAAAAGGTGCGTTCGACAACGCCTTTGC CGCAGTGATGATCGCAGTCGTCGCCCTGCTGGGTTTCACCTCGGTCGGCATCGCCATGTGCACCCGCAAGACGCGCTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CGTCCGCTCCGATTGCCGGAAACAAAAAAGGCCCGCATAGCTGCGGGCCTTTGATTTCATTGGTGCCGGAGACAGGAGTCGAACCTGCGACCTTCGCATT ACGAATAAGCGCCACTTCCCTCGGCAGAAGCTGGAAGTCAGTAAAATCGGGACCTCCAGCGTATCTAACATGCCATTTAGTGTGGCTGATGCCAGACTTT GGCCTATTCTGGGACATCTGTGTGTTGGGCCATGAGGATTCTACTGGTGAGCATGCACAACCCTCCCCATCCTGGTGAGTTCATCACCAACATCTACCTG GAACCTAACGGTATCAGCGGTCGCGAGCTGGCGGAAAAGCTAGGTGTTGCCCCCTCTACCCTGAGCCGCGTCTTGAATGGCACCAGTCGCGTTACGCCGG AAATGGCATTGCGCCTGTCCGTAGCGCTTGGCCGCTCGCCTGAAAGCTGGCTGGCCATGCAGGATGCCTACGATCTTCGGGTTGCTCGCCAGCATGTTGG
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| Amino Acid Sequence |
>arabinose efflux permease family protein
MKSSLRWLVLGILSSALLLIVIDMTVIYLALPSLTYELRASATEKLWIVNAYALTVAGLLPGMGALGDRFGHKRMFISGLVVFGWASLGAAFSPTPEILI AARVALAVGAAMMMPATLAIIRHVFEDTRERALAFGIWAAIASGGAAFGPVVGGVLLEHFWWGSVFIINVPIVLLALVLAVIWVPSRPGNPQRPFDLLAS LWVMGALVGLTLAIKEAGKADPSLLQASVAACTAVVCALAFLRRQRQTAVPMIDFTLFRDRSFSAGVITASVASAALMGMELVVSQRLQLVVGLSPLQAG LTILPIPLGAFIVGPLAGLALPRIGAERILSTSLALSAAGALLYLLGYAGEQWLQILSFSLLGFGVGAAMTAASSAMLLQAPADRAGMAASIEEVSYELG GALGIAILGSLMSAVYAAAIVTPGTMALPDLALDSLDGALIAAEALPEAIAAPLISLAKGAFDNAFAAVMIAVVALLGFTSVGIAMCTRKTR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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