Pseudomonas stutzeri RCH2, Psest_2144
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri RCH2 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
ACCGTGACGGCAGCTTCACCCCCGGCCTGTATGCGCGGCTGAAGCTGGTCGGCAGCGCCACCTACGACGCCGTGCTGATCAAGGACGTCGCCGTTGGTAC CGACCTCGGCAAGAAATTCGTCCTGGTGCTGGCCGAAGACGGCACCGTCGCCTACCGGCCGGTCGAGCTCGGCCCCAAGCTCGAAGGGCTGCGCATCGTC CGCAGCGGTCTGGCGAAGGGCGAGAGCATCGTGGTCAATGGCCTGCAGCGCGTGCGCCCGGGCAGCCCGGTGCAGCCGGAGTCGGTGCCCATGGCCGACG CCGAAACGCTGGCCACGCTCCGCCAGCAGAACCGTGCGATCAGCGAGGCGATGAAGCCACAGGTGGTCGAGCGCACCCTGGCTCAGCGCCCAAGCAGCTA AATACCGACACAACTCACCTGAACTCCGGCGCGCATGCCGCGCCAATCCGATCGATCCGCCAGGGCGCCGCCAGATGCGCGCCCTACCCCGGAGTGCGCC
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| DNA Sequence for Gene |
>Psest_2144
ATGAATTTCTCGCAATTCTTCATCAGGCGGCCGATTTTCGCCGCCGTGCTGTCGCTGGTGATCCTCATCGGCGGGGCCATCTCGCTGTTCCAGCTGCCGA TCAGCGAATACCCCGAAGTCGTCCCGCCCACCGTGGTGGTACGCGCCAACTTCCCCGGCGCCAACCCCAAGGTGATTGGCGAAACCGTCGCCTCGCCGCT GGAGCAGGCCATCACCGGCGTCGAGGGCATGCTCTACATGTCGTCCCAGGCGACCGCCGACGGCAAGCTGACGCTGACTATCACCTTCGGCCTGGGCACT GACCTGGACAACGCCCAGGTGCAGGTGCAGAACCGCGTCACGCGCACCATGCCGACCTTGCCCACCGAGGTGCAGCGCCTCGGCGTGACCGTGGACAAGG CCTCGCCCGACCTGACCATGGTGGTGCACCTGACCTCGCCGGATCAGCGCTACGACATGCTCTACCTGTCCAACTACGCCGCGCTCAACGTCAAGGACGA ACTGGCGCGGCTGGATGGCATCGGTGACGTGCAGCTGTTCGGCATGGGCGATTACTCCCTGCGCGTCTGGCTCGACCCGGAGAAGGTCGCCTCGCGCAAC CTCACCGCATCGGACGTGGTCAACGCGATCCGCGAGCAGAACCGCCAGGTCGCCGCGGGCTCCTTGGGTGCGCCGCCGGCACCGGGTGCGACGGACTTCC AGCTGTCGATCAACACCCAGGGCCGCCTGGTCACCGAGGAAGAATTCGAGAACATCATCATCCGCGCTGGTGAAGATGGCTCGATCACCCGCCTGCGGGA CATCGCCCGCGTCGAACTGGGCTCCAGCCAGTACGCGCTGCGTTCGCTGCTGAACAACCAGCCCGCCGTCGCCATTCCGGTATTCCAGCGCCCGGGGTCG AACGCCATCGAGATCTCCGACTCGGTGCGCGCACGCATGGCGGAACTGAAACGCGACTTCCCGGAAGGCGTGGACTACGAGATCGTCTACGACCCGACCA TCTTCGTGCGCGGCTCCATCGAGGCGGTGGTACATACGCTGCTCGAAGCCATCGTGCTGGTAGTGCTGGTGGTGATTCTGTTCCTGCAGACCTGGCGCGC CTCGATCATTCCACTGGCCGCCGTGCCGGTGTCGCTGATCGGCACCTTCGCGGTCATGCACCTGCTCGGTTTCTCGCTCAACGCGCTGTCGCTGTTCGGC CTGGTGCTGGCCATCGGCATCGTGGTGGACGACGCCATCGTCGTGGTGGAAAACGTCGAGCGCAACATCGGCCTCGGCAAGTCGCCGGAGGAAGCGACCC GTCAGGCCATGAAGGAAGTGACCGGGCCGATCATCGCAACGGCGCTGGTGCTCTGCGCGGTGTTTATCCCGACTGCATTCATTTCCGGCCTCACCGGGCA GTTCTACCAGCAGTTCGCGCTGACCATCGCCATCTCCACCGTGATCTCGGCGTTCAACTCGCTGACTCTGTCGCCGGCACTGGCCGCTGCGCTCCTCAGG TCGCACGACGCGCCCAAAGACGGCTTCTCGCGGCTGCTCGATCGGATTTTTGGCGGCTGGCTGTTCGCACCGTTCAACCGCATGTTCGACCGCGCCAGCC ACGGCTACGTCGGTCTGGTGCGGCGCATCCTGCGCGGCAGCGGCATTGCACTGGTGGTCTATGTCGGACTGGTCGGCCTCGGCTACATGGGCTTCGCCAG CACGCCGACCGGTTTCGTGCCGCCGCAGGACAAGCAGTATCTGGTCGCCTTCGCCCAGCTGCCGGACGCCGCCACGCTGGACCGCACCGAGGACGTGATC AAGCGCATGTCGGAAATTGCCGGCAAGCACCCGGGCGTGGAAAACACCGTGGCCTTCCCGGGCCTGTCGATCAACGGCTTCACCAACAGCCCGAACAGCG GCATCGTCTTCACTCCGCTCAAACCCTTCGATGAGCGCAAGGACCCATCGCTCTCGGCCAACGCCATCGCGGCGGACCTGAACGGCCAGTTCGCGCAGAT CCAGGATGCCTTTATCGCCATCTTCCCGCCGCCACCGGTACAGGGGTTGGGCACCATCGGCGGTTTCCGTGTGCAGGTGCAGGACCGCGGCAACCTCGGC TACGAGGAGCTGTACAGCCAGGTGCAGAACGTCATTGCCAAGAGCGCGGACTATCCGGAGCTGGCCGGCCTGTTCACCAGCTATCAGGTGAACGTGCCGC AGGTGGATGCCGACATCGACCGGGAAAAAGCCAAGACCCACGGTGTGCCGATCGACGAGATCTTCGACACCATGCAGGTCTACCTCGGCTCGCTGTACGC CAACGACTTCAACCGCTTCGGCCGTACCTATCAGGTCAACGTCCAGGCGGACCAGAAGTTCCGCCTGGCACCGGAGCAGATCGGTCAGCTGAAGGTGCGC AACAACCGCGGCGAGATGGTCCCGCTGTCGACCTTCGTCAACGTCACCGACAGCGCCGGCCCGGATCGGGTCATGCACTACAACGGCTTCCTCACCGCCG AGATCAACGGCGCGGCCGCGCCGGGCTACAGCTCCGGTCAGGCCGAGGCGGCCATGGAGCGCCTGCTCAAGGCTGAACTGCCGAACGGCATGAGCTACGA ATGGACCGAGCTGACCTATCAGCAGATCCTCGCTGGCAATACCGCAATCTTCGTTTTCCCGCTCTGCGTGCTGCTGGCCTTCCTGGTGCTCGCTGCGCAA TACGAGAGCTGGAGCCTGCCGCTGGCGGTGATTCTGATCGTACCGATGACACTGCTCTCGGCCATCACCGGGGTGATCCTCGCCGGTAGCGACAACAACG TGTTCACCCAGATCGGCCTGATCGTGCTGGTGGGCCTGGCGTGCAAGAACGCCATCCTCATCGTCGAGTTCGCCAAGGACAAGCAGGAGGAAGGCATGGA CCGGCTGGCGGCCATCCTCGAAGCCTGCCGCCTGCGTCTGCGGCCGATCCTGATGACCAGCTTCGCCTTCATCATGGGCGTGGTGCCGCTGGTGCTTTCC AGCGGGGCCGGTGCCGAGATGCGTCATGCCATGGGTGTCGCGGTGTTCAGCGGCATGCTCGGGGTGACCTTCTTCGGGCTCCTGCTGACCCCGGTGTTCT ATCTGGTGATTCGCGCCTTCGTCGAGAAACGCGAAGCCCGCAAGGCGGTTTACAAGGAGGTTCAGGCATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AGTTCTTCGCCCTTTCACTGCTCTCTCTGGCACTGAGCGCCTGCGCGGTCGGCCCGGATTACCGGGCACCGCAACCTGAACCGGCGCGCATCAGCCAAGC AGCGAGTGGCGATTACGACCGCTCGCGCTTCGAGGCAGCCTGGTGGCAACAGTTCGAAGACCCGACGCTGGATGCCCTGGTCGGCGAAGCGCTGGCCGAG AACCGCGAACTGCGCATCGCCTATGCCCGCCTGCGTGCCGCCCGGGCGATCCGCGATGACGTCAGCAATGATCGTCTGCCCACCGTCACTGCCGGTGCCA GCGCCGATATCGGCAAGGCCCAGCAACCGGGCGTGACCGAGCAGCGCGTGAATGCAGAACGCTATGATCTGGGGCTGGACATGGCCTGGGAGCTGGACCT GTTCGGCCGCATCCAGCGCCGTCTGGAATCCAGCGAGGCGCAGGCCGATGCCGTCGAAGCCGAGCTCTATCAGCTGCAGGTCAGCCTGATTGCCGAGCTG
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| Amino Acid Sequence |
>hydrophobe/amphiphile efflux-1 (HAE1) family transporter
MNFSQFFIRRPIFAAVLSLVILIGGAISLFQLPISEYPEVVPPTVVVRANFPGANPKVIGETVASPLEQAITGVEGMLYMSSQATADGKLTLTITFGLGT DLDNAQVQVQNRVTRTMPTLPTEVQRLGVTVDKASPDLTMVVHLTSPDQRYDMLYLSNYAALNVKDELARLDGIGDVQLFGMGDYSLRVWLDPEKVASRN LTASDVVNAIREQNRQVAAGSLGAPPAPGATDFQLSINTQGRLVTEEEFENIIIRAGEDGSITRLRDIARVELGSSQYALRSLLNNQPAVAIPVFQRPGS NAIEISDSVRARMAELKRDFPEGVDYEIVYDPTIFVRGSIEAVVHTLLEAIVLVVLVVILFLQTWRASIIPLAAVPVSLIGTFAVMHLLGFSLNALSLFG LVLAIGIVVDDAIVVVENVERNIGLGKSPEEATRQAMKEVTGPIIATALVLCAVFIPTAFISGLTGQFYQQFALTIAISTVISAFNSLTLSPALAAALLR SHDAPKDGFSRLLDRIFGGWLFAPFNRMFDRASHGYVGLVRRILRGSGIALVVYVGLVGLGYMGFASTPTGFVPPQDKQYLVAFAQLPDAATLDRTEDVI KRMSEIAGKHPGVENTVAFPGLSINGFTNSPNSGIVFTPLKPFDERKDPSLSANAIAADLNGQFAQIQDAFIAIFPPPPVQGLGTIGGFRVQVQDRGNLG YEELYSQVQNVIAKSADYPELAGLFTSYQVNVPQVDADIDREKAKTHGVPIDEIFDTMQVYLGSLYANDFNRFGRTYQVNVQADQKFRLAPEQIGQLKVR NNRGEMVPLSTFVNVTDSAGPDRVMHYNGFLTAEINGAAAPGYSSGQAEAAMERLLKAELPNGMSYEWTELTYQQILAGNTAIFVFPLCVLLAFLVLAAQ YESWSLPLAVILIVPMTLLSAITGVILAGSDNNVFTQIGLIVLVGLACKNAILIVEFAKDKQEEGMDRLAAILEACRLRLRPILMTSFAFIMGVVPLVLS SGAGAEMRHAMGVAVFSGMLGVTFFGLLLTPVFYLVIRAFVEKREARKAVYKEVQA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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