Strain | Pseudomonas stutzeri RCH2 chromosome, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
GTGGTCAAGCCGTTCAAGAAAGTGCTGCCCTGAGCCGACACAGCAGGGAATAGCGATTCTGCCCCGGCCGCTGGCGCTCCACGGCCTCGTAAGGAAATAG GAGTTCCGATGCGTCAACGACCGCTCTCCCTGCTGTTTGCCCTGACACTGCTCGCCCCCGTGCTACACGCCGAGGAAGCGGCGCCGGAACCCTACGTTCC AGCGGTCGAATCCAGCGAGCCCATCGACTTCGAAGAGATGGAAGGCGCCCCTGAACCGCAGGCCGCGACGCCGGGTGCCGACACTACCCAAGCATTGCTA CTGCGCCTGCGCGAAGAAAACCGGCGCCTGCGCCTGCAGTTGCAAACCGAGCAGGCGAAAGCGATACCGGTACTGCTGAACGATCAGCAGCAATGGTTTG CCGTGGGCGGTGCAGTCGGTGTCGTCAGTTTTACCCTGGGCCTGCTGGTCTCGCGCGGTCGCCGCCGGCGCCAATGGCTCAACTGATCATTCGAGCCGAC
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DNA Sequence for Gene |
>Psest_1884
ATGAGTGAACTACTGCTTATCGACGACGACCAGGAGCTCTGCGAGCTGCTGATCAGCTGGCTGGCTCAGGAAGGCTTCGTCGCCCACGCCTGCCACGATG GCAAAAGTGCGCGCCAGGCACTTGCAGAGCACCAACCGGCAGCGGTGGTCCTGGACGTGATGCTCCCCGATGGCAGCGGCCTGGAGCTGCTCAAACAGCT GCGCAGCGAGCATCCGCAGCTGCCGGTGTTGATGCTTTCCGGCCGTGGCGAACCGCTGGATCGCATTCTGGGTCTGGAACTCGGTGCCGACGATTACCTT GCCAAGCCCTGTGACCCGCGCGAACTTACCGCGCGCCTGCGTGCCGTTCTGCGCCGTAGCCAGCCTACGGCGACGCCGAGTCAGGTCGAACTCGGCGATC TCTGCTACAGCCCAGCGCGCGGCATAGCCAGTGTCGGCGGTGCCGAGGTCAGCCTGACGTTGTCGGAGGGCCGCATTCTCGAGGCGCTGCTGGCGCAACC CGGCGAGCCGATGGACAAACAGGCCCTGGCCCAGCATGCACTGGGGCGCAAGCTCACCCTCTACGACCGCAGCCTGGACATGCACGTCAGCAACCTGCGC CGCAAGCTCGGCCCCCACGCCGACGGCAACCCGCGCATCGTGGCGCTGCGCAGCCGTGGCTACCTTTACGCTGTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CCGTCTTTACCGAGGCTTTACCCTGGGCTGACCGCGCTTGACCTTGCCCTGCATAGACTGAGCTCATCCGGTCACAGCCCGCCGCCAGCAATCAGATCAT GCTGCGGCACGGCCGGTGTCCCACATCCAGGAGAGTATTCAGATGCGCAAATCACTCGTAGCCCTACTGTTCGCCGCCGCCCTGCCAGCCCTCGCCGTAG CCATGCCTGGTGGCATGCAGGACGGCCAGCACACGGGCAAGCGCGCCCCACACATGTTTCACGGCCTGGACCTGACCAAAGAGCAACAGCGCGAAATGCG CAAGCTGATGGGCGAGCAGATGAAGCAGCGCCAGGAAATCACCCAGCGCTATCTCGACAAGCTGCCTGAAGCCGAGCGCAAGGCCATGCAGAAGGATCTG GACGCCAGTCGGGAAACGACCCACCAGAGCATGCGAGCCCTGCTCAAGCCCGAGCAGCAACAAGCCTTCGACGAAGGCATGAAGAAAATGGAAGAAAAGC
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Amino Acid Sequence |
>response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
MSELLLIDDDQELCELLISWLAQEGFVAHACHDGKSARQALAEHQPAAVVLDVMLPDGSGLELLKQLRSEHPQLPVLMLSGRGEPLDRILGLELGADDYL AKPCDPRELTARLRAVLRRSQPTATPSQVELGDLCYSPARGIASVGGAEVSLTLSEGRILEALLAQPGEPMDKQALAQHALGRKLTLYDRSLDMHVSNLR RKLGPHADGNPRIVALRSRGYLYAV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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