Pseudomonas stutzeri RCH2, Psest_1151
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri RCH2 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GAACGCCCGCATGTAGCGGACACCGCAAGGTCGCTGTCGTATTCGACAGTCCGTCTTCTGCGGCTCGCATTGCGGGCCGCAACCGGCAACGCCGGATTTG CCCAACCCGCCGATGAAGGGTCATCGGCATGGAACCACTCTACTAGGAGAGATCGACAATGAAGCTTCGTCCTCTGCATGACCGCGTCGTGATTCGTCGC AGCGAAGAAGAAACCAAGACCGCAGGCGGCATCGTCCTGCCGGGCTCCGCTGCCGAGAAGCCGAACCGTGGCGAAGTCGTTGCTGTGGGTACCGGCCGCG TGCTGGACAACGGCGAAGTACGCGCCCCGGCCGTGAAGGTCGGTGACAAGGTGGTGTTCGGCCCTTACTCCGGCAGCAACACCGTCAAGGTCGACGGCGA AGATCTGCTGGTGATGAGCGAGAACGAAATTCTCGCCGTCGTCGAAGCCTGATCACCCGCGAATCTCCGTAAATAATTCACGAATTGAGGATCAATCAAC
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| DNA Sequence for Gene |
>Psest_1151
ATGGCTGCTAAAGAAGTCAAATTCGGCGACTCCGCACGCAAGAAGATGCTGGTCGGTGTAAACGTTCTGGCTGACGCCGTTAAAGCGACCCTCGGCCCGA AAGGCCGCAACGTCGTGCTGGAGAAGAGCTTCGGTGCTCCGACCATCACCAAGGACGGCGTTTCCGTCGCCAAGGAAATCGAGCTGAAGGATCGCTTCGA GAACATGGGCGCTCAGCTGGTCAAGGACGTTGCGTCCAAGGCCAACGACGAAGCCGGTGACGGCACCACCACCGCTACCGTTCTGGCCCAGGCCATCGTC AACGAAGGCCTGAAGGCTGTTGCGGCCGGCATGAACCCGATGGACCTCAAGCGCGGCATCGACAAGGCCACCATCGCCATCGTCGCCGAGCTGAAGAACC TGGCCAAGCCGTGCACCGACTCCAAGGCGATCGCCCAGGTTGGCACCATTTCCGCCAACTCCGACTCCTCCATCGGCGACATCATCGCCGAAGCCATGGA GCGCGTAGGCAAGGAAGGCGTGATCACCGTCGAGGAAGGTTCGGGTCTGGAGAACGAGCTGTCCGTCGTCGAAGGCATGCAGTTCGATCGTGGCTACCTG TCGCCGTACTTCATCAACAAGCCGGACACCATGGTCGCCGAGCTGGACAGCCCGCTGCTGCTGCTGGTCGACAAGAAGATCTCCAACATCCGCGAACTGC TGCCGGTGCTGGAAGCCGTTGCCAAGGCCGGTCGTCCGCTGCTGATCGTTGCCGAAGACGTCGAAGGCGAAGCCCTGGCCACCCTGGTGGTCAACAACAT GCGCGGCATCGTCAAGGTTGCTGCAGTCAAGGCCCCGGGCTTTGGCGATCGCCGCAAGGCCATGCTGCAGGACATCGCCATCCTGACTGGCGGTACCGTG ATTTCCGAAGAAGTCGGCCTGAGCCTGGAGACCGCTACCCTGGAGCACCTGGGTAACGCCAAGCGCGTCGTGCTGAACAAGGAAAACACCACCATCATCG ACGGCGCTGGTCAGCAGGCTGATATCGAAGCCCGCGTTGCCCAGATCCGCAAGCAGGTCGAAGACACCACTTCCGACTACGACAAAGAGAAGCTGCAAGA GCGTCTGGCCAAGCTGGCCGGCGGTGTTGCCGTGATCAAGGTCGGTGCCGGTACCGAAGTCGAGATGAAAGAGAAGAAGGCCCGCGTAGAAGACGCCCTG CACGCTACCCGTGCTGCCGTCGAAGAAGGCGTGGTTCCTGGCGGTGGCGTTGCCCTGGTGCGCGCTCTGCAGGCCATCTCCGAGCTGAAGGGCGAGAACG AAGACCAGAACGTCGGTATCGCGCTGCTGCGTCGTGCCGTCGAAGCGCCGCTGCGTCAGATCGTCTCCAACGCTGGTGGTGAGCCGAGCGTGGTGGTCGA CAAGGTCAAGCAGGGCGAAGGCAACTTCGGCTTCAACGCCGCCTCCGACACCTACGGCGACATGATCGAGATGGGTATCCTCGATCCGGCCAAGGTAACC CGTTCTGCTCTGCAGGCCGCGGCTTCCATCGGCAGCCTGATGATCACCACCGAAGCGATGATCGCTGAAGTGGCTGACGACAAGGCCGCTGGCGGCATGC CGGACATGGGTGGCATGGGCGGTATGGGTGGTATGGGCGGCATGATGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCCGCCCGGCTCCTGAGCTGTAAAAGAAAAACCCCGCCTGGTGCGGGGTTTTTTTTGCCTTGCGACAGGCGCGTCGTAACAGGGGGAATGCAGCCGTTCG TCCAAAAGCCTGCCGGAATTAACCAGCTAGGCTACGGTCAGTTAACTATCCGACTAATCAAGGGCTTACGCCATGAAGCTGGAAATTGCTCGAGGATTGT TTCTGGTCGGCGCGCTTGGAGTCACCACCCTGTGCGTGGCGGCCTGGAATGAGCCGGGTGCCGCCCTGGTACAAAGCAGTGTAGAGCGCAGCTATTGCCC ACTACCGCCTAACGGCAAGTCCCGGTTCGACGCTGCACGCCCCGACCAGGATCTGCTGTTGCTGCTGTACGGCCTGTCCCAGGGGATGCGCTGAAACGAC AACGCCCGGCCTTTAGCTGACGGCGATCCCGGCGTGCTCGCTTGGGCTGCGGTCCGGTTGGGCTACCAGGTCATAGACTGCCGGTAGCACGAACAGGGTG
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| Amino Acid Sequence |
>chaperonin GroL
MAAKEVKFGDSARKKMLVGVNVLADAVKATLGPKGRNVVLEKSFGAPTITKDGVSVAKEIELKDRFENMGAQLVKDVASKANDEAGDGTTTATVLAQAIV NEGLKAVAAGMNPMDLKRGIDKATIAIVAELKNLAKPCTDSKAIAQVGTISANSDSSIGDIIAEAMERVGKEGVITVEEGSGLENELSVVEGMQFDRGYL SPYFINKPDTMVAELDSPLLLLVDKKISNIRELLPVLEAVAKAGRPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGTV ISEEVGLSLETATLEHLGNAKRVVLNKENTTIIDGAGQQADIEARVAQIRKQVEDTTSDYDKEKLQERLAKLAGGVAVIKVGAGTEVEMKEKKARVEDAL HATRAAVEEGVVPGGGVALVRALQAISELKGENEDQNVGIALLRRAVEAPLRQIVSNAGGEPSVVVDKVKQGEGNFGFNAASDTYGDMIEMGILDPAKVT RSALQAAASIGSLMITTEAMIAEVADDKAAGGMPDMGGMGGMGGMGGMM
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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