Pseudomonas stutzeri RCH2, Psest_0815

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0009055 electron transfer activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF46626
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0020037 heme binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF46626
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG psh00910 Nitrogen metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psh01120 Microbial metabolism in diverse environments 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:2.140.10.20 - IPR003143 Cytochrome cd1-nitrite reductase, C-terminal domain superfamily 129 560 0.0
Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III IPR009056 Cytochrome c-like domain 37 120 5.4E-9
SUPERFAMILY SSF46626 Cytochrome c IPR036909 Cytochrome c-like domain superfamily 12 141 1.29E-17
Gene3D G3DSA:1.10.760.10 - IPR036909 Cytochrome c-like domain superfamily 21 127 2.4E-22
Pfam PF02239 Cytochrome D1 heme domain - - 157 555 0.0
SUPERFAMILY SSF51004 C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily 129 560 7.85E-121

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.