Pseudomonas stutzeri RCH2, Psest_0673
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri RCH2 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GGCGAGCCGCCGCCGAGCGAAATGATGAAGTCGCAAGCGCTTTCGCGCAGCTGGCTCAGGCCCTTCTCGACGTTGCCAACGGTTGGATTGGGTTGTGCGC CGTCGAATACGACGGATTGGATATCCGCGGCAGCCAGCAGCGTCGCGACCTTTTCGGCCACGCCTGCGCGAGCCAGCCCGACGTCGGTAACGATCAGCGC TTTGCGAAAGCCATAGTTGGCGATGGCGACCATCGCTTCATCGAGGCTTCCGATGCCCATCATGTTCACCGCGGGTATGAAGAAGGTGCTGCTCATGGAA AGTCCCCTGTGCTTGTCTGAAAACTGGTCTCGCAGCATCGCATCTGGATCAGGCGGCGGAATGACCTGGCTCAAGAAGATGACCGCTCAGTCGGGTTTCG GGCCCCGCGTCTGACCAACGGCGTCTGGTCGGCTGGTATGGGCTGCTGTGCTAACCTGCGTCGCAGTTTTCAGCGGGTCTGACCGCTTCAGAGGGCATCC
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| DNA Sequence for Gene |
>Psest_0673
ATGCATATCCATATTCTCGGCATCTGCGGCACCTTCATGGGTTCGCTCGCGGTGCTGGCCAAGGAACTCGGGCATCGGGTCACCGGTTCCGACGCCAACG TCTATCCCCCGATGAGCACCCAGTTGCAGGCTCAGGGCATCGAGCTGACCCAGGGCTACGAGCCGAGTCAGCTCGAGCCGGCGCCGGATCTGGTGGTGAT CGGTAATGCGCTGTCGCGCAGCAACCCGGCGGTGGAGTACGTGCTGAACAAGGGCCTGCCCTATGTCTCCGGTCCGCAGTGGCTGGCCGATCACGTGCTG CAGGGGCGCTGGGTGCTGGCTGCGGCCGGCACCCACGGCAAGACCACCACCAGCAGCATGCTGGCCTGGGTGCTGGAACATGCCGGCATGAGCCCGGGCT TTCTCATCGGTGGCGTGCCGCAGAATTTCGGCATCTCCGCGCGCCTGGGTGGCACGCCGTTCTTCGTGGTGGAGGCCGACGAGTACGACAGCGCCTTCTT CGACAAGCGCAGCAAGTTCGTCCACTACCGCCCGCGCACGGCGATCCTGAACAACCTGGAATTCGATCACGCGGACATCTTCCCGGACCTCGCGGCCATC GAGCGGCAGTTCCACCACCTGGTGCGTACCGTGCCCAGCGAAGGGCTGGTCATCCATCCCGAGTCCGAACAAGCGCTCAAACGCGTGATCGGCATGGGCT GCTGGACGCCGGTGCAGACCACCGGGGATGGCGGTCAGTGGCAGGCGAAACTGCTCAGCGCCGACGGTTCGCGCTTCGAAGTGATCTTCGATGGTGCCGT GCAGGGCGTGGTCGAGTGGGAGCTGACCGGCCAGCACAACGTCAACAATGCGCTGGCGACGCTCGCCGCGGCCCGCCACGTCGGTGTGCTGCCGAAGCAG GGCGCCGAGGCGCTGAGCGAATTCCGTAGCGTCAAGCGGCGCATGGAGAAGGTCGCCGAGGTCAATGGCGTGACCATCTATGACGATTTTGCCCATCACC CCACGGCTATCGCAACCACCCTCGACGGGCTGCGCAAGCGTGTGGGCGATACACCGATCATCGCGGTGATCGAGCCACGCTCCAACTCGATGAAGCTCGG CGCGCACCGCGAGGGCCTTGCTGAATCCGTGGCACTGGCCGATCAGGCGATCTGGTACGCGCCTGCCAACCTTGGCTGGGACCTGGCCGCCACCGTCGCC GGCTCGCCGGTGGAGACTACGGTGTGCGATTCGCTGGAGGCGATCATCGCCAAGGTGAAAGCTGACGCCGTGCCGGGCACCCAGGTGGTGGTGATGAGCA ATGGCGGTTTTGGCGGCTTGCACGGCAGGCTGGCCGCGGCGTTGAGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TTGTTCAAGGTGGAAAACGCTTCGCGGTTTTCCACCCTACGCTGATCATGGGTAGGGTAGAAATCGCCGAAGGCATTTCCACGCGCATCGCATCAGGAGC AGATTGAATGAACGGACCGGAACGCATCACCCTGGCCATGACCGGCGCCTCCGGCGCGCAGTACGGCCTGCGCCTGCTGGACTGTCTGATCCAGGAAGAC CGCGAGGTGCACTTCCTGATTTCCAAGGCCGCGCAGCTGGTGATGGCCACCGAGACCGACGTGGTGCTGCCGGCCAAGCCACAGGCGATGCAGGCCTTCC TCTCCGAATACACCGGTGCCGCTGCCGGGCAGATCCGCGTGTTCGCCAAGGAGGACTGGATGGCGCCGCCGGCCTCCGGCTCCGGCGCCCCGACCGCCAT GGTGGTGGTACCGTGCTCCACCGGCACGCTGTCGGCGATCGCCACCGGCGCCTGCAACAACCTGATCGAGCGTGCCGTCGACGTTGCCCTCAAGGAGCGC
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| Amino Acid Sequence |
>UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase
MHIHILGICGTFMGSLAVLAKELGHRVTGSDANVYPPMSTQLQAQGIELTQGYEPSQLEPAPDLVVIGNALSRSNPAVEYVLNKGLPYVSGPQWLADHVL QGRWVLAAAGTHGKTTTSSMLAWVLEHAGMSPGFLIGGVPQNFGISARLGGTPFFVVEADEYDSAFFDKRSKFVHYRPRTAILNNLEFDHADIFPDLAAI ERQFHHLVRTVPSEGLVIHPESEQALKRVIGMGCWTPVQTTGDGGQWQAKLLSADGSRFEVIFDGAVQGVVEWELTGQHNVNNALATLAAARHVGVLPKQ GAEALSEFRSVKRRMEKVAEVNGVTIYDDFAHHPTAIATTLDGLRKRVGDTPIIAVIEPRSNSMKLGAHREGLAESVALADQAIWYAPANLGWDLAATVA GSPVETTVCDSLEAIIAKVKADAVPGTQVVVMSNGGFGGLHGRLAAALS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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