Pseudomonas stutzeri RCH2, Psest_0295
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri RCH2 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
ACCTGTCCGTCATTCTCGAAGTGCTGACCGAACACGGCAGCAGGCAGATCATGGCGCAGCGCTACGTCCCGGCTATCAAGGACGGCGACAAACGCATCCT GATGATCGACGGAGAGCCGATTCCGTATTGCTTGGCACGAATTCCCGCAGCGGGTGAAACGCGTGGCAATCTCGCCGCGGGCGGCCGAGGTGTGGCACAA CCGCTATCCGATCGTGATCGTGAGATCGCAGCAATCGTCGGCCCGGAGTTGCGCAAGCGCGGTCTGCTGTTTGTCGGCCTGGACGTAATCGGTGACTACC TCACCGAAATCAACATCACCAGCCCCACCTGCATCCGCGAAATCGACAACGCCTTCGATACCCGAATCGGCGAGCGCCTCATGGACGCGATCGCGGGCAA GCTGCAAGCTTGAACCAGCTAACAGCTTTGAGCTTGGAGCTTGCGGCTCCCAGCTCAAAGCCGGCAGACTGCGCGGCACTTCGAGCCGACCCGACCTGCG
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| DNA Sequence for Gene |
>Psest_0295
ATGAACGCCGCTATCCGCCAACCTGCGCCTGAAACCACCCGAGTCCGCCCGGCGGACCGGCTCGGCTTCACGCTTTTTTTAGCTGCCGCATTGCACCTGG CCCTAATTCTCGGCCTGGGCTTCACGCTGTCCGAACCGAAACAGATCAGCAAGACGCTGGAAATCACTCTGTCAACGTTCAAGAGCGAGGAAAAGCCCAA GGAAGCAGACTTTCTCGCCCAGGACAACCAGCAGGGCAGCGGCACGCTGGAGCACAAGGCGTCGCCAAAAACCACCGAGCAGGCGCCCTTTCAGGACACC GAGGTGCGCAAGGTGACGCCACCGGCAGCACCACCGCGCAGCACGCAACCGGAACCGGCGAAAACAGTCGTCACCACCCGCAGCCGGCAGCCGGACAAGG CTGATACCAAGCAGCAGACCCAGCCGCAGCCCGAACCGCAGGCCGCTCCGGCGTTCGACAGCTCTCAGCTGAGCGCCGAAATCGCCAGCCTCGAAGCTGA GCTGGCACATGACGTCGAGCGCTACGCCAAACGGCCAAGGGTCAGCCGGCAGAATAGCGCTGCCACCATGCGCGATATCAGCGCCTGGTACCGCGATGAA TGGCGCAAGAAGGTCGAGCGCATCGGCAATCTCAACTACCCGGACGAAGCGCGTCGCCAGCAGATCTACGGCAGCCTGCGCATGCTAGTGACCATCAACC GTGACGGCACCGTACAAGAGTTGCGCGTGATCGAGTCCTCCGGCCAGCCGGTGCTAGATGATGCCGCGCTGCGCATCGTGCGACTGGCAGCGCCTTTTGC GCCCTTCACCGGCGAACTGGCACAGAAATTCGATCAGGTCGAGATCATTCGCACCTGGCGCTTCGAGCGCGGCGACAAGCTTTCCAGCCGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCATCGCTGGACCAACCGTCGCACCTGTAGCCGGAAAGCAGAGCAACGCTTAAGCTAGCGCGCATGAAAAGCACCGCGCCCAGTTACCTCAAGCATCACT TTCTGATCGCCATGCCCCAGATGGCCGATCCGAACTTTGCCCAAACGCTGATCTACCTCATCGAGCACGGCGCAGAGGGCGCCATGGGCCTGATCATCAA TCGACCGAACGGACTCAGTCTGGCCGATGTTCTGGAACAGTTGCGCCCAGACGGGCCGATTCCATCGCTGTGCCAGAGCCTGCCGATCTTTTCCGGCGGC CCGGTGCAGACAGACCGCGGTTTCGTCCTGCATTCTGCCGATCATCAATTTCAGGCCACGCTGGCGCTCGGCCCGCTCGGCATGTCCACGTCACAGGACG TGCTGTTCGCCATCGCCGATGGCCAAGGCCCCGCCCGGCATTTCATCGCCCTGGGCTACGCCGGCTGGGAAGCAGGGCAGCTGGAGGCCGAACTGGCTGA
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| Amino Acid Sequence |
>TonB family protein
MNAAIRQPAPETTRVRPADRLGFTLFLAAALHLALILGLGFTLSEPKQISKTLEITLSTFKSEEKPKEADFLAQDNQQGSGTLEHKASPKTTEQAPFQDT EVRKVTPPAAPPRSTQPEPAKTVVTTRSRQPDKADTKQQTQPQPEPQAAPAFDSSQLSAEIASLEAELAHDVERYAKRPRVSRQNSAATMRDISAWYRDE WRKKVERIGNLNYPDEARRQQIYGSLRMLVTINRDGTVQELRVIESSGQPVLDDAALRIVRLAAPFAPFTGELAQKFDQVEIIRTWRFERGDKLSSR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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