Pseudomonas stutzeri RCH2, Psest_0286

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas stutzeri RCH2 chromosome, complete genome. [Details]
DNA Sequence Upstream of Gene
ATCATTCTCGTCGGCGAAATGCGCGACCTGGAAACCATCCGCCTGGCGCTGACCGCTGCGGAAACCGGTCACCTGGTGTTCGGCACCCTGCACACCACCT CAGCGGCGAAGACCATCGACCGCGTGGTCGACGTGTTCCCGGCCGAAGAGAAGTCCATGGTCCGCTCGATGCTTTCCGAATCGCTGCAGGCGGTGATCTC GCAGACGCTGCTGAAGAAGGTCGGCGGCGGCCGTGTGGCGGCTCACGAGATCATGATCGGCACGCCGGCGATCCGTAACCTGATCCGCGAGGACAAGGTG GCGCAGATGTATTCCTCGATCCAGACCGGTGGCTCGCTGGGCATGCAGACCCTCGACTCATGCCTCAAGGGACTGCTCGCCAAAGGGCTTATCTCGCGAG ACAGCGCGAAGGAAAAGGCCAAGCAGCCAGAGAACTTCTAAACGCCTGACAACCCCTGGCGCCGCCCGACGCGGCGCTTGCCACGATTGCGAGTAAAACG
DNA Sequence for Gene
>Psest_0286
ATGGAATTCGAGAAACTTCTGCGCCTGATGGTGGAAAAGGGCGGCTCCGATCTGTTCATCACGGCAGGCGTACCGCCTTCGATGAAGGTCAACGGCAAGA TCATGCCGGTGAGCAAGACGGCGATGTCGCCGGAAATGACCCGCGAGACCGTGCACGGCGTGATGAACGAGCAGCAGCGCCGCGAGTTCACCGAGAACCA CGAGTGCAACTTCGCCATCAGCGCCCGCGGTATCGGCCGTTTCCGGGTCAGCGCCTTCTACCAGCGCAACCTCGCCGGCATGGTGCTGCGGCGTATCGAA ACCAACATTCCGACCATCGAAGAACTCAAGCTGCCGGACGTCCTCAAGAAGCTGTCGATGACCAAGCGCGGGCTGGTGCTGTTCGTCGGTGCCACCGGTA CCGGCAAGTCGACCTCGCTGGCCTCGATGATCGGCTACCGCAACAAGAATTCCAGCGGGCACATCATCTCCATCGAAGACCCGATCGAATTCATCCACCA GCATCAGAGCTGCATCGTCACCCAGCGCGAGGTCGGTATCGACACCAGCTCGTTCGAGGTGGCCTTGAAGAACACCCTGCGCCAGGCGCCGGACGTGATC CTCATCGGCGAGATCCGCACCCGTGAAACCATGGACTACGCCGTAGCGTTCGCCGAAACCGGTCACCTGTGCCTGGCGACCCTGCACGCCAACAACGCCA ACCAGGCGCTGGATCGCATCATCAACTTCTTCCCGCCTGACCGGCACAACCAGGTGTGGATGGATCTGTCGCTCAACCTCAAGGCCATCGTCGCCCAGCA GCTGGTGCCGACGCCTGACGGCAAGGGGCGCCGTGCGGTGATCGAGGTGCTGATCAATACGCCGCTGGCGGCCGATCTGATCCGCAAGGGCGAGGTGCAT GAGCTCAAGTCGCTGATGAAGCGTTCCACCGAGCTGGGTATGCAGACCTTCGACCAGGCGCTGTACAACCTCTATGTGCAGGGCGAGATCACCTACGAAG ATGCGTTGCTGCACGCCGATTCGGCCAACGACCTGCGGCTGCTGATCAAGCTGGGATCGGAAACCGATGGCGAACATCTGACCAGCGTGTCGCAAGGCCT GAGCCTCGAGGTCAGTGACGACGATCCGGGCCGCAGCTTCCGCTAG
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TCGGCCGGTTTTGCATCCCGGCCGATGCGCTTGCCGCTTCTCGCGGCGACGCGCTCGGCCTGGCCATCACGCTGCGCACCGGCCCGCGCGCGGCTCATCA ACTGCGGGATCAACATGCCTTCGGGTAGATTCTTCCAGAAACGCACCGGCAGGTTGCTCTCCAGTACGCCGCGGTTCAATCGGGCCGGGTTGAACGTGCT TTCGTAATATGCCTTCCATAGCTCGCCGCCCGGGTCCGCGGCGCTCTGCGCCAACTGCCGCCATTGTGGTGGGCAGGGTCGGGTGTAGTACATCTGCTGG CCGTCCCAGCAAACAGCTTCTTCCGGGGTCGCGATCAGCCAGCGGTTGCCACCCATCCGTTCGGCGAAATGCCCGGCCGCCCAGGGCAGTACGTCGTGCG CGGGCTCGAACCAGGCGACGTGCTGCGGTCCATCACTGGTCTGCAGTGGGCTGAAGCGCAGAAAGGCATGCAGATGATGGGCCTCACGGCGGACTGCCTT
Amino Acid Sequence
>pilus retraction protein PilT
MEFEKLLRLMVEKGGSDLFITAGVPPSMKVNGKIMPVSKTAMSPEMTRETVHGVMNEQQRREFTENHECNFAISARGIGRFRVSAFYQRNLAGMVLRRIE TNIPTIEELKLPDVLKKLSMTKRGLVLFVGATGTGKSTSLASMIGYRNKNSSGHIISIEDPIEFIHQHQSCIVTQREVGIDTSSFEVALKNTLRQAPDVI LIGEIRTRETMDYAVAFAETGHLCLATLHANNANQALDRIINFFPPDRHNQVWMDLSLNLKAIVAQQLVPTPDGKGRRAVIEVLINTPLAADLIRKGEVH ELKSLMKRSTELGMQTFDQALYNLYVQGEITYEDALLHADSANDLRLLIKLGSETDGEHLTSVSQGLSLEVSDDDPGRSFR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site