Pseudomonas stutzeri RCH2, Psest_0010
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri RCH2 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
TATTTCCAGCAAGTCGGTGGCGTCGAGTGCTATCCGGTCACCGGCGAGATCACCTACGGTCTCGAGCGCCTGGCCATGTACCTGCAGGGCGTCGACTCGG TCTATGACCTGATCTGGGCCGATGGCCCGTTCGGCACCGTGACCTACGGCGACGTGTTCCACCAGAACGAGGTGGAGCAGTCGACCTACAACTTCGAGCA CGCCAATGTGCCGAAGCTGTTCGAACTGTTCGATTTCTACGAGAGCGAAGCCAACCGGCTGATGGCTGCCGAGCTGCCGCTGCCGGCCTACGAGATGGTG GTCAAGGCCTCGCACACCTTCAACCTGCTCGATGCCCGCCGCGCCATTTCGGTCACCGCGCGCCAGCAATACATCCTGCGCGTACGCAGCCTGGCGCGCT CGATCGCCCAGAGCTACCTGCTGGCCCGCGCCAAACTCGGCTTCCCCATGGCCACCCCCGAACTGCGTGACGAAGTGCTGGCCAAGCTGGAGGCTGCAGA
|
|
| DNA Sequence for Gene |
>Psest_0010
ATGAGTGCACTGGATTTCCTCGTCGAACTGGGTACCGAAGAGCTGCCACCGAAGGCGCTCGCCAAGCTGGCCGAAGCCTTCTGCGCCGGTATCGAGAAGG GCCTGAAGGACGCCGGCCTTAGCTTCGTCAAGACGCAGGCCTATGCCGCGCCGCGGCGCCTGGCCGTGCTGGTCGAACAGCTGGCAACCCAGCAGCCCGA TCGCAGCATCAACCTCGACGGCCCGCCGATGCAGGCCGCCTTCGACGCCGACGGTGAGCCGACCCAGGCCGCGTTGGGCTTTGCCCGCAAGTGCGGCGTG GATCTGGCCGAGATTGATCGCAGCGGGCCGAAACTCAAGTTCAGCCGCACCATCGAAGGCCAGCCGGCCAGCCAGCTGCTGCCGGGTATCGTCGAAGCGT CGTTGAACGACCTGCCGATCCCCAAGCGCATGCGCTGGGCCGCGCGCAAGGAAGAATTCGTCCGCCCGACCCAGTGGTTGGTGATGCTCTTCGGTGAGCA GGTAATCGATTGCGAGATCCTCGCCCAGCGTGCCGGCCGTGAATCCCGCGGCCACCGCTTCCACAGCCCGGGCCAGGTGCATATTTCCAAGCCTTCCAGC TATCTGGAAGACCTGCGTGGCGCCCATGTGATCGCCGACTTCGCCGAGCGTCGCGAGCTGATCGCCAAGCGCGTCGAGCAGCTCGCTGCCGAACAGAACG GCACGGCCATCGTGCCGCCGGCGCTGCTCGATGAAGTGACTGCGCTGGTCGAGTGGCCGGTGCCGCTGGTCTGCTCGTTCGAGGAACGCTTCCTCGAAGT GCCGCAGGAAGCGCTGATCACCACTATGCAGGACAACCAGAAGTACTTCTGCCTGCTGGATGCCAACGGCAAGCTGCTGCCGCGCTTCATCACCGTGGCG AACATCGAATCCAAGGACCCGGCGCAGATCGTTTCCGGTAACGAAAAGGTCGTGCGTCCGCGTCTGACCGATGCCGAGTTCTTCTTCAAGCAGGACAAGA AGCAGAAGCTCGACAGCTTCAACGAGCGCCTGAAGAACGTGGTGTTCCAGGCCCAGCTCGGCACCGTCTATGACAAGGCCGAGCGCGTCTCGCGCCTGGC CGGGCTGATCGCCGAGCGTACCGGTGGCGACAAGCAGCGTGCCGCGCGCGCCGGGCTGCTGTCCAAATGCGACCTGGCCACCGAGATGGTCGGCGAATTC CCGGAAATGCAGGGCATTGCCGGTTACTACTACGCACTCAACGACGGCGAGCCGGAAGACGTGGCACTGGCGCTGAACGAGCAGTACATGCCGCGCGGTG CGGGCGGCGAACTGCCAAGTACGCTCACCGGCGCGGCCGTGGCGGTGGCGGACAAGCTCGACACCCTGGTCGGCATCTTCGGCATTGGCATGCTGCCGAC CGGTTCCAAGGACCCCTACGCCCTGCGCCGTGCGGCTCTCGGCGTGCTGCGTATCCTTATCGAGAAGCGTCTGGATCTGAATCTGGTCGAGGCGGTCAAC TTCGCCATCGGCCAGTTCGGTACGCAGGTCAAATCGGCCGGGCTGGCCGATCAGGTTCTCGAGTTCATCTTCGATCGCCTGCGCGCCCGCTACGAGGACG AAGGCGTCGATGTTGCCGCCTACCTGTCGGTGCGTGCCGTGCAGCCGGGCTCGGCGCTGGACTTCGACCAGCGTGTGCAGGCGGTACAGGCCTTCCGTAC GCTGCCCGAAGCCGCTGCGCTGGCCGCGGCCAACAAGCGCGTCTCCAACCTGCTGAGCAAGTTCGATGCGAAGCTGCCGGAAGCGGTCGAGCCACGCTGG TTCGACAACGCTACCGAGTTCTCGCTGTACTCGGCGATCCAGCAGGCCGAGCAGGCGGTACAACCGCTCGCCGCGGCGCGTCAGTACCGCGAGGCACTGG AGCGTCTGGCGCACCTGCGTGGCCCGGTGGATGCCTTCTTCGAGGCGGTGCTGGTGAATGCCGAAGATGCTTCGGTACGCGCCAACCGTTATGCCTTGCT GGCCCGGCTGAGAGGACTGTTCCTTGGCGTTGCCGATATTTCCGCACTTGGCTAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GCCCGTGAAGCTGATCGTGCTGGACCGCGATGGCGTGATCAACGAGGACTCCGACGAGTACGTGAAATCGCTGGCGGAGTGGATTCCCATTCCCGGGTCG CTGGAAGCCATCGCGCGGCTGTGCAAGGCCGGCTGGACGGTGGCGGTTGCCACCAACCAGTCTGGCGTCGCGCGCGGCAAGTTCGACCTCAGCACCCTCG GCGATATGCATTTCAAGATGCAGCAGCTGGTGATGGAGCAGGGCGGACGTATCGATCTGATCGTGCACTGCCCGCACGGTCCTGACGATGGCTGCAACTG CCGCAAGCCGAAGCCTGGAATGTTTCGCAGCATTGCCGAGCACTTCGGCCTGGCGGACCTGAAGGGTGTGCCGGTGGTTGGCGACAGCCACCGCGATCTG CATGCCGGCATGCTGCTCGGCGGCGTGCCCTACCTGGTCAGAACCGGCAAAGGCCTGCGCACCCTGGAAGGTACGTTGCCGCCAGGTACCCAGGTCTTCG
|
|
| Amino Acid Sequence |
>glycyl-tRNA synthetase subunit beta
MSALDFLVELGTEELPPKALAKLAEAFCAGIEKGLKDAGLSFVKTQAYAAPRRLAVLVEQLATQQPDRSINLDGPPMQAAFDADGEPTQAALGFARKCGV DLAEIDRSGPKLKFSRTIEGQPASQLLPGIVEASLNDLPIPKRMRWAARKEEFVRPTQWLVMLFGEQVIDCEILAQRAGRESRGHRFHSPGQVHISKPSS YLEDLRGAHVIADFAERRELIAKRVEQLAAEQNGTAIVPPALLDEVTALVEWPVPLVCSFEERFLEVPQEALITTMQDNQKYFCLLDANGKLLPRFITVA NIESKDPAQIVSGNEKVVRPRLTDAEFFFKQDKKQKLDSFNERLKNVVFQAQLGTVYDKAERVSRLAGLIAERTGGDKQRAARAGLLSKCDLATEMVGEF PEMQGIAGYYYALNDGEPEDVALALNEQYMPRGAGGELPSTLTGAAVAVADKLDTLVGIFGIGMLPTGSKDPYALRRAALGVLRILIEKRLDLNLVEAVN FAIGQFGTQVKSAGLADQVLEFIFDRLRARYEDEGVDVAAYLSVRAVQPGSALDFDQRVQAVQAFRTLPEAAALAAANKRVSNLLSKFDAKLPEAVEPRW FDNATEFSLYSAIQQAEQAVQPLAAARQYREALERLAHLRGPVDAFFEAVLVNAEDASVRANRYALLARLRGLFLGVADISALG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|