Strain | Pseudomonas stutzeri DSM 10701 chromosome, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
GAGCGGATGACGGCGTTCATCTGCGATTACCTGCGCATCATGTCCTCCGGCAATATGGCGCCCCACGAGCTGGAAGGCCTGTTCGACATGGAGCTGGCCA GTCTCAAGGAGGAACTGGAGCATCCGTCCCATGCGGTGACGCGCGTGGCGGACGGACTGCCGGCGGTGGGCATCGTCGCGGCGGTGCTGGGCATCGTGAT CACCATGGCGATCCTGGCCGATGCCAGCAACGTCATGATTGGCGAGAAGGTTGCCACGGCGCTGGTGGGGACCTTCATCGGCATCCTCGCGTCCTACGGT TTCGTCGGTCCTCTGGCCGCCTCGCTGGAGCACGATGCGCGGGAAGAACTGAATCTTTATGAAGCCATCAAGGCGACGCTGGTCGCCTCGGCATCCGGCA TGCCGCCGACCCTGGCCGTCGAGTTCGGGCGCAAGGTGCTGTTCGCCGCGCACCGGCCGACGTTCGCCGAGCTCGAACAAGCCATGCGTGGCAGCTAAGC
|
|
DNA Sequence for Gene |
>PSJM300_17275
|motB
ATGGACAACAACCAGCCGATCATCGTCAAGCGCGGCGCCAAGCGCGGAGGCGGGCATCACGGCGGCGCCTGGAAGATCGCCTTCGCCGACTTCATGACCG CGATGATGGCCTTCTTCTTGGTGATGTGGCTGATGAGTTCGGCCACGCCGGAGCAGAAGCGCGCGATATCCGGGTACTTCCAGGATCCGATCGGGTTCAC CGAAAGCGCCAGCCCGCACGTCATCGACCTGGGCGGAACGCCCACGCCATCGCCGGATCGCACGCTCAACGCCGACGTCGAGCCGGCCATGCAGCAAAGC GAATCCAGCCTCGATGCCGAACAGGCGCAGACCTTTGCCGAGCAGCTGGAAAACCAGCGTCTCGAACTGCTGCTGCAGGAATTGCAGAACAAGATCGAGG AGGACCCCGATCTGACCCGCTACATGGATCAGATTCTGTTCGAGATCACCCAGGACGGGCTGCGCATCCAGATCATGGATGCCGAGAACCGGCCGATGTT CGACCTCGGCAGCGCTCGGTTGCAGCCTTACTTCGAGGACATTCTGCTGGCCATGGCGGATGTCATCCAGACGATGCCGAACAAGATCAGTATCAGCGGC CACACCGATGCCAAGCCGTACGCGGGGCAGGGCGATTTCGGCAACTGGGAACTGTCGGCCAGTCGGGCCAACGCGGCGCGACGCGCACTGGTCGCGGGGC GTTATCCCGAAGAGCAGATCGCGCGCGTGGTGGGCTATGCCTCATCGGCATTGTTCGACCGGGAAGATCCGTTCAACCCGGTCAACCGCCGTATCGACAT CCTGGTGCTGACCAAGAAGGCGCAGCGCTCCATCGAGCAGGGGCAGCAGCCGAGCATGGAAGCCGGCGAAGACGCTGGTGCCGCCGGGACGAGCGCCGAG CCCGCTACCGGCGGCGGTGAGCCGCTACAGCCGGGAGCGGTGCGCGAACGCCTGAACATCTTCGAGGATGGCGTGCTGAAGTTCGATGAGCCGGAAAGCT GA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
TAAAGCCTCCAGCTAGTAATCCGCCTCGGGCATGCTGCTGAGAATGTGCCGATAGCTGGCCATGCGCTGTGGCTGGATGCGGCCTTCGTCGAGCGCCTTG AGCAGGGCGCAGCCGGGTTCGCGATCATGCTTGCAGTCGCGAAAGCGACAATGGCCCAGCACATCGCGGAACTCGATGAAACCGGCTTCCACATCCGCGC GGCTGACATGCATCAGCCCGAATTCGCGTATGCCGGGCGAATCGATCAGCTCGCCGCCACCGGGGAAATGAAAAAGCCGTGCGGTGGTGGTGGTGTGAGT GCCCTTGCCGGTCATTTCCGATAGCGAGCCCACCCGCGTTTCCACGCCGGGCAACAGGCTGTTCACCAGCGAGGACTTGCCGACGCCCGACTGTCCGACG AATACGCTGACATGGCCATCGAGGCGTGCGCGCAGGCTGTCCATGCCGTCGCCATCGCGGGCGGAGACTTCCAGCAGCGGGTAGCCGAGGCTGCGATAGA
|
|
Amino Acid Sequence |
>flagellar motor protein MotB
MDNNQPIIVKRGAKRGGGHHGGAWKIAFADFMTAMMAFFLVMWLMSSATPEQKRAISGYFQDPIGFTESASPHVIDLGGTPTPSPDRTLNADVEPAMQQS ESSLDAEQAQTFAEQLENQRLELLLQELQNKIEEDPDLTRYMDQILFEITQDGLRIQIMDAENRPMFDLGSARLQPYFEDILLAMADVIQTMPNKISISG HTDAKPYAGQGDFGNWELSASRANAARRALVAGRYPEEQIARVVGYASSALFDREDPFNPVNRRIDILVLTKKAQRSIEQGQQPSMEAGEDAGAAGTSAE PATGGGEPLQPGAVRERLNIFEDGVLKFDEPES
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|