Pseudomonas stutzeri DSM 10701, PSJM300_15765
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri DSM 10701 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CGGCGGCGTCGGAGCGGGGGAATTCGCCGATGACCGAACCATCGACCGGGCTGGTATTGACGAAATATTCACCGTTGACCGGGGCGGTGAATTCGCCACC GATGTAGTTGCCGTAGCGCGCTTCGAGGGACAGGACGGCGCCAGGCGTACCGGGTTTTGCGTAAATCATGACGGCGATCTCTCTTGTGGAGTGGGAAGGG GCAGCACGCTGACTCGGAGCATGCTGCGAGCCGCGATGGGATGACGCCCTGGCTCGATACTGGCGTCAAACCACGTGAAAAATCAGTGTGACCGCATCAG CAAGCTTAGCCGGCTTGCGGCGTTTCACCTCGTTTCAGTCGACCGTTGATCTCCTCCACCACGGCCGGCAGGTCGGCAATGGTAATGCTCCGAACCGGAT CGCGGCTGGCCCCTTGGTTCTCGTGCTAATCTGCTGCGCAATCTTCACGCCTGAGCCTTTCTGCGACGGGGTTCGAGCGCGGTGTTCTTCGAGGTCATTC
|
|
| DNA Sequence for Gene |
>PSJM300_15765
ATGCATATTCACATTCTCGGCATCTGCGGCACCTTCATGGGTTCGCTGGCCGTTCTCGCGAAAGAACTGGGCCATCGCGTCACCGGCTCCGATGCCAATG TCTATCCGCCCATGAGTACCCAGCTGGAAGCCCAGGGCATCCAGCTGACGCAGGGCTATGAGCCGAGCCAGCTCGATCCGGCGCCGGATCTGGTGGTGAT CGGCAACGCGCTGTCGCGTGGCAACCCGGCGGTGGAATACGTGCTGAACAAAGGCTTGCCCTATGTCAGCGGCCCGCAGTGGCTGGCCGACCACGTGCTG CAGGGCCGTTGGGTACTGGCCGCGGCGGGCACCCACGGCAAGACCACCACCAGCAGCATGCTGGCCTGGGTGCTGGAGCACGCCGGCATGAGCCCGGGCT TTCTGATCGGTGGTGTGCCGCAGAACTTCGGCATCTCCGCGCGGCTGGGCGGCACGCCGTTCTTCGTGGTCGAGGCGGACGAATACGACAGCGCCTTTTT CGACAAGCGCAGCAAGTTCGTCCATTACCGTCCGCGTACCGCCATCCTGAATAATCTGGAATACGATCACGCGGATATCTTTCCCGATCTGGAAGCGATC GAGCGGCAATTCCATCACTTGGTGCGTACCATCCCCGGTGAGGGGCTGGTCATCCACCCGACCACAGAGGAGGCCATCGAGCGCGTGCTGGGCATGGGGT GCTGGTCGTCGGTGCAGACCACTGGCGAAGGGGGCGACTGGCAGGCCAGGCTGCTCAGCGAGGACGGCTCGCGTTTCGAGGTGATCTTCCAAGGTGAGGT ACAGGGTGTCGTCGACTGGGAACTGACCGGCCGGCACAACGTTGCCAATGCATTGGCGACCCTGGCTGCAGCACGTCACGTCGGCGTACTGCCGAAGCAG GGTGCCGAGGCGTTGAGCGAATTCCGCAGCGTCAAGCGGCGCATGGAGAAGGTCGCCGAGATCGACGGCGTGACGATCTACGATGACTTCGCTCACCATC CGACCGCCATCGCCACCACCCTGGATGGCCTGCGCAAGCGCGTCGGCGATGCGCCGATCATCGCCGTGATCGAGCCGCGCTCCAATTCGATGAAGCTCGG TGCGCATCGCGAAGGCTTGCCCGAATCGGTGCGCCAGGCCGATCAGGTGGTCTGGTACGCGCCGCCGAACCTGGGCTGGGACCTGGCCGGCACCGCGGCC AATTGCCCGGTGCCGGCGGTGGTCTGCGATTCGCTGGAGGCCATCATCGAGCGGGTCAAGGCCCAGGTCGCGCCCGGCACCCAGGTGGTGATCATGAGCA ACGGTGGCTTCGGCGGGCTGCATGGCAAGCTGGCGGAGGCGCTGCGCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
CCGCCCATGGTGGAAAACGCTTTGCGGTTTTCCGCCCTACGATGACCGTGGGTGGGTAGGGTGGAAATCGCCGAAGGCATTTCCATGCGTGGGATTGGAG AGAAACTGGAGGCTGTATGAGCGGACCGGAACGCATCACCCTGGCCATGACCGGCGCCTCCGGCGCGCAATACGGCTTGCGCCTGCTCGACTGCCTGGTT CAGGAGGATCGCGAGGTGCACTTCCTCATCTCCAAGGCCGCGCAACTGGTGATGGCCACCGAGACCGACGTGGTGCTGCCGGCCAAGCCGCAGGCGATGC AGGCTTTTCTCAGCGAATACACCGGTGCCGCAGCCGGGCAGATCCGCGTGTTCGCCAAGGAGGACTGGATGGCGCCGCCGGCTTCCGGCTCTGGCGCGCC GACCGCCATGGTGGTGGTGCCCTGTTCCACCGGCACCCTGTCGGCGATTGCCACCGGTGCCTGCAACAACTTGATCGAGCGTGCGGCGGACGTGACGCTG
|
|
| Amino Acid Sequence |
>UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase
MHIHILGICGTFMGSLAVLAKELGHRVTGSDANVYPPMSTQLEAQGIQLTQGYEPSQLDPAPDLVVIGNALSRGNPAVEYVLNKGLPYVSGPQWLADHVL QGRWVLAAAGTHGKTTTSSMLAWVLEHAGMSPGFLIGGVPQNFGISARLGGTPFFVVEADEYDSAFFDKRSKFVHYRPRTAILNNLEYDHADIFPDLEAI ERQFHHLVRTIPGEGLVIHPTTEEAIERVLGMGCWSSVQTTGEGGDWQARLLSEDGSRFEVIFQGEVQGVVDWELTGRHNVANALATLAAARHVGVLPKQ GAEALSEFRSVKRRMEKVAEIDGVTIYDDFAHHPTAIATTLDGLRKRVGDAPIIAVIEPRSNSMKLGAHREGLPESVRQADQVVWYAPPNLGWDLAGTAA NCPVPAVVCDSLEAIIERVKAQVAPGTQVVIMSNGGFGGLHGKLAEALR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|