Pseudomonas stutzeri DSM 10701, PSJM300_12360
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri DSM 10701 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CGGCCTTTTTCACCCACAAATCGCCCACATGTTATCCACAGGTTGTTCCTGCTCCGCGCCTTGATTTAGGTCATGATCGGCACTATCGTGTCGCCCGCTT GCGATCAGGCCCAATATATTGGGGCTGAAATCAACCAAAGACACAAGATCGCAAAAAAGCAAGGCATTTATTTCAACGCCTCACCCGGCGCCCACGACAT CGCCCCGCAAGCCAGGAAACAGCGCGTTCGGCAGCAGATGGAGGTACCGGGGCGATGCCTCTCCCGATGCCCATGGATGGTTGCCCCACCAAGCGCATCA CACTATATGTTGTGTTTCAAGGTTGTGATCCTCACGGGTGATGACTATGCTTCGTGACATTCGATTCGTAGCGTCCTTCAGAGACATCCCATGCGTCGCG CACCAGCGCGCGCCACTGTAATAACCGAGACCACGGGCCGCGGCAGAATGGCCTGATACCTAACGTGCGACAGCGACATAAAGAGAATCCGGAGACCCCC
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| DNA Sequence for Gene |
>PSJM300_12360
ATGCAGAACGAGTCCATTCGCGAGAATTCGCAGGCAGCCGATACCACACCGGATCTGGCCGCCACCGCGCCGGGCCAGCTACGCGTGATCAAGCGCAACG GCACCGTGGTGCCCTACACCGATGACAAGATCACCGTTGCCATCACCAAGGCCTTTCTCGCAGTGGAAGGTGGCAGCGCCGCCGCTTCCTCGCGCATCCA TGACACCGTCGCGCGCCTGACCGAGCAGGTCACCGCCACCTTCAAGCGCCGCATGCCCTCCGGCGGCACCATCCATATCGAGGAAATCCAGGACCAGGTC GAACTGGCCCTGATGCGCGCCGGCGAGCAGAAGGTCGCCCGCGACTACGTGATCTACCGCGAAGCCCAGGCCACCAAGCGCAAGAGCGCCAATGCCGGCA GCGACATCGCTCAGCCGCACCCGAGCATTCGCATCACCCAGGCCGACGGCAGCCAGCGCCCGCTGGACCTGGGCCGCCTGCAGACCATCATCCGCGAAGC CTGCGAAGGCCTGGCTGAAGTCGATGGCGCGCTGATCGAACGTGAAACCCTGAAGAACCTCTACGACGGTGTCGCGGAAAAAGACGTCAACACCGCCCTG GTGATGACCGCGCGCACCCTGGTCGAGCGCGAGCCGAACTACTCCTACGTCACCGCCCGCCTGCTGATGGACACCCTGCGCGCCGAAGCGCTGGGCTTCC TCGACGTCGCTGAAGCCGCTACCCACCACGAGATGGCCGACCTCTACGCCAAGGCGCTGCCGGCCTACGTGGAAAAAGGTGTGGAGTTCGAGCTGCTCGA CCCGCGCCTGAAGGAATTCGACCTGGCCAAGCTGGGCGCCGCGATCAACCACGAGCAGGACCAGCAGTTCACCTACCTCGGCCTGCAGACCCTCTACGAC CGCTACTTCATCCACAAGGACAACATCCGCTTCGAGCTGCCGCAGATCTTCTTCATGCGCGTCGCCATGGGCCTGGCCATCGAGGAAGAACAGCGCGAAG CCCGCGCCATCGAGTTCTACAACCTGCTGTCGTCCTTCGACTACATGGCTTCCACGCCGACCCTGTTCAACGCCGGCACCCTGCGTCCGCAGCTGTCCTC CTGCTACCTGACCACCGTGCCGGACGACCTGGGCGGCATCTACGATTCCATCCGCGATAACGCCCTGCTCTCCAAGTTCGCCGGCGGCCTGGGCAACGAC TGGACCCCGGTGCGCGCGCTGGGCGCCTACATCAAGGGCACCAACGGCAAGTCCCAGGGCGTCGTGCCCTTCCTGAAAGTGGTCAACGACACCGCCGTGG CCGTGAACCAGGGCGGCAAGCGCAAGGGCGCGGTCTGCGCCTACCTGGAAACCTGGCACCTGGACATCGAGGAATTCCTCGAGCTGCGCAAGAACACCGG TGACGACCGCCGCCGCACCCACGACATGAACACCGCCAACTGGATTCCGGACCTGTTCATGAAGCGCGTCTTCGACGACGGCAAGTGGACCCTGTTCTCG CCGAGCGAAGTACCCGACCTGCACGACCTCACCGGCAAGGCCTTCGAGGAGCGCTACGAGTACTACGAGGCGATGATCGAGTACGGCAAGATCAAGAACC ACAAGACCCTGCAGGCCAAGGATCTGTGGCGCAAGATGCTCTCCATGCTGTTCGAGACCGGCCACCCCTGGCTGACCTTCAAGGACCCGTGCAACCTGCG CAGCCCGCAGCAGCACGTCGGCGTGGTGCACAGCTCCAACCTCTGCACCGAGATCACGCTGAACACCAACAAGGACGAAATCGCCGTCTGCAACCTGGGC TCGGTCAACCTGCCGAACCACATCGTCGACGGCAAGCTCGACACCGCCAAGCTGGAGCGCACCGTACGCACAGCCGTGCGCATGCTCGATAACGTCATCG ACATCAACTACTACTCGGTGCCGCAGGCGCGCAATTCCAACTTCAAGCACCGCCCGGTGGGCCTGGGCATCATGGGCTTCCAGGACGCGCTGTACCTGCA GCACATCCCCTACGGTTCCGATGCCGCCATCGATTTCGCCGACAAGTCCATGGAAGCGGTCAGCTACTACGCCATCCAGGCCTCCTGCGACCTGGCCGAC GAGCGTGGCGCATACGAGACCTTCCAGGGTTCGCTGTGGAGCCAGGGCATCCTGCCGCTGGATTCCCAGCAGATCCTCATCGAGGCCCGTGGCCAGAAGT ACATCGACATTGACCTCTCCGAGTCCCTGGACTGGGCCCCGGTACGTGCCCGCGTCAAGAACGGTATCCGCAACTCGAACATCATGGCCATCGCGCCGAC CGCGACCATCGCCAACATCACCGGCGTGTCGCAGTCCATCGAGCCGACCTACCAGAACCTGTACGTGAAATCGAACCTGTCCGGCGAATTCACCGTGATC AACCCCTACCTGGTACGCGACCTCAAGGCGCGCGGCCTGTGGGACGCGGTGATGATCAACGACCTCAAGTACTACGACGGTTCCGTGCAGCAGATCGAGC GCATCCCGCAGGAGCTCAAAGACCTCTACGCGACCGCCTTCGAAGTGGAAACCAAGTGGATAGTCGACGCCGCCAGCCGCCGCCAGAAGTGGATCGACCA GGCGCAGTCGCTGAACCTCTACATCGCCGGCGCCAGCGGCAAGAAGCTCGACGTGACCTACCGCATGGCCTGGTACCGTGGCCTGAAAACCACCTACTAC CTCCGTGCCCTGGCCGCGACCAGCACCGAGAAGTCCACCGTCAATACCGGCAAGCTGAACGCCGTGTCCAACGGCAGCGGCGACGGCTTCAGCGGCAGCC CGGCGAAGGCGGCTCCGGCCCCGGAACTGTCCGCCGGCCCGGCACCGGTGCCAAAAGCTTGTGCGATCGATGAGCCCGACTGCGAAGCCTGCCAGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GTTAACTGGCGCACGAACCTGAGCGGCGCCCGCGTTGTTGCCGGGCCGCTTCGGCTCCTCACGTACAACAGTACGCTCCGGGGCCAAAGCAACCCGGCGC CTAGCGCTCACTCGCTCAGTTTCGCGCTCGCACGGAGCTGCCGCTGATAAGCGTGCTCTTCGTAGGAGCGAACTTGTTCGCGAAACGCTATCCACCAACT CACAGCCGAGTTAACGCATAGCCCGAGGCCACCCCAATCCAGTCCCCTCGCCCCTCCGGGGAGAGGGCTAGGGTGAGGGGCAGCCTCACCAGACAACACA AATGGCCGGGCCCAACCCCCGACCATCCCTCTCCCCTCGCGGGAGAGGGCCAGGGAGAGGGGGCAACCCCACCCGACAACACAAAAAGGCCGGCCCTAAA CCCCGACCTAATACAGAACACCGGGACCCAGGCGCCACCGCCCTCCCCTGAAAGAACACCGCTTTTGCGTGCAAACCAAAAGCCGCCCGAACACTTCCGA
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| Amino Acid Sequence |
>ribonucleotide-diphosphate reductase subunit alpha
MQNESIRENSQAADTTPDLAATAPGQLRVIKRNGTVVPYTDDKITVAITKAFLAVEGGSAAASSRIHDTVARLTEQVTATFKRRMPSGGTIHIEEIQDQV ELALMRAGEQKVARDYVIYREAQATKRKSANAGSDIAQPHPSIRITQADGSQRPLDLGRLQTIIREACEGLAEVDGALIERETLKNLYDGVAEKDVNTAL VMTARTLVEREPNYSYVTARLLMDTLRAEALGFLDVAEAATHHEMADLYAKALPAYVEKGVEFELLDPRLKEFDLAKLGAAINHEQDQQFTYLGLQTLYD RYFIHKDNIRFELPQIFFMRVAMGLAIEEEQREARAIEFYNLLSSFDYMASTPTLFNAGTLRPQLSSCYLTTVPDDLGGIYDSIRDNALLSKFAGGLGND WTPVRALGAYIKGTNGKSQGVVPFLKVVNDTAVAVNQGGKRKGAVCAYLETWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVFDDGKWTLFS PSEVPDLHDLTGKAFEERYEYYEAMIEYGKIKNHKTLQAKDLWRKMLSMLFETGHPWLTFKDPCNLRSPQQHVGVVHSSNLCTEITLNTNKDEIAVCNLG SVNLPNHIVDGKLDTAKLERTVRTAVRMLDNVIDINYYSVPQARNSNFKHRPVGLGIMGFQDALYLQHIPYGSDAAIDFADKSMEAVSYYAIQASCDLAD ERGAYETFQGSLWSQGILPLDSQQILIEARGQKYIDIDLSESLDWAPVRARVKNGIRNSNIMAIAPTATIANITGVSQSIEPTYQNLYVKSNLSGEFTVI NPYLVRDLKARGLWDAVMINDLKYYDGSVQQIERIPQELKDLYATAFEVETKWIVDAASRRQKWIDQAQSLNLYIAGASGKKLDVTYRMAWYRGLKTTYY LRALAATSTEKSTVNTGKLNAVSNGSGDGFSGSPAKAAPAPELSAGPAPVPKACAIDEPDCEACQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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