Pseudomonas stutzeri DSM 10701, PSJM300_11930
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri DSM 10701 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CCCGTTTCCGGCAATCTTCCGAAAAATGTAGTGCCTTAAAAAAATCACTACAAAACGATTGACGAACCTTTTTTGGCGGAGCATGATTGCCTCGCTCCCG CTAACCAGGGGCCCTGGCAAGGGTCTCCGGAACGCGCTCAGCCAACCAGCAGAGCCGATCCGTGACTGTACTGCCCACAAGGCGGACTGACGAGGTTGCG ACTGGAACGAGTCGTCCCGAGGGACGGGGAAGCGATTAACGTATCAGCTCGAGACGTCAGTACTGCTGAGTCACTCAACGACCCCGTGTCGCTGTGTGCC GGAATGCCCACGATCATTCCGCAGCTGGCCGGCCTCTTGCGGTCGTAACTGCACACCCCTCCTCTCCTTGGTTCAATCCTCGTCCCGGTCGGTATTTCGA CGCTCTGCCGCGTGTTGCCTCGCTGATCAGCGCTAGCACGTAGGTTTCGGTGGGAAAGTCGGTGCTCAACCAAACACGAATTTCTTTGAAAGGATTGACC
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| DNA Sequence for Gene |
>PSJM300_11930
ATGTCCGCTTATCAAAACGACATCAAGGCCGTTGCCGCTCTGAAAGAAGTAGCTGGAAGCAGCTGGAGCGCTATCAACCCTGAGTCCGTGGCTCGCATGC GCGCTCAGAACCGCTTCAAGACCGGTCTGGAAATCGCTCAGTACACCGCCGACATCATGCGCAAGGACATGGCCGAGTACGACGCCGACTCGTCCGTTTA CACGCAGTCGCTGGGTTGCTGGCATGGCTTCATCGGTCAGCAGAAGCTGATCTCCATCAAGAAGCACCTGAAGACCACCAACAAGCGCTACCTCTACCTC TCCGGCTGGATGGTCGCCGCCCTGCGTTCCGAGTTCGGCCCGCTGCCGGACCAGTCGATGCATGAGAAGACTGCCGTTTCCGACCTGATCGAGGAGCTGT ACACCTTCCTGCGCCAGGCCGACAGCCGCGAGCTGGACCTGCTGTTCACCGCTCTGGACGCTGCCCGCGAAGCCGGCGACAAAGCCAAGGCCGCCGAGAT CCAGTCGCAGATCGACAACTACGAAACCCACATCGTCCCGATCATCGCCGACATCGACGCCGGTTTCGGCAACCCGGAAGCCACCTACCTGCTGGCCAAG CGCATGATCGAAGCCGGCGCCTGCTGCATCCAGATCGAGAACCAGGTTTCCGATGAGAAGCAGTGCGGCCATCAGGACGGTAAAGTGACCGTTCCTCACG CCGACTTCCTCGCCAAGATCGCGGCCGTTCGCTACGCGTTCCTCGAGCTGGGTATCGACAACGGCGTGATCGTTGCCCGTACCGACTCCCTGGGTGCCGG CCTGACCAAGCAGATCGCCGTGACCAAGGAGCCGGGCGACCTGGGTGACCTGTACAACTCCTTCCTCGACTGCGAAGAAATCACCGAGGCCGAGCTGGGC AACGGCGATGTCGTGATCAAGCGTGAAGGCAAGCTGCTGCGTCCCAAGCGTCTGCCGTCCAACCTGTTCCAGTTCCGCAAAGGCACCGGTGAAGACCGTT GCGTGCTGGACTGCATCACCAGCCTGCAGAACGGCGCCGACCTGCTGTGGATCGAAACCGAGAAGCCGCACGTTGGCCAGATCAAGGCCATGGTCGACCG CATCCGTGAAGTGATTCCGACTGCCAAGCTTGTCTACAACAACAGTCCGTCCTTCAACTGGACCCTGAACTTCCGTCAGCAGGTATTCGACGCGTTCGTC GCCGAAGGCAAGGACGTTTCCGCCTACGACCGCGCCAAGCTGATGAGCGTCGAGTACGACGAGACCGAACTGGCCCAGGTCGCCGACGAGAAGATCCGCA CCTTCCAGAAGGACGGTTCGGCCCACGCCGGCATCTTCCACCACCTGATCACCCTGCCGACCTACCACACCGCTGCGCTGTCGACCGACAACCTGGCCAA AGGGTACTTCGCAGAAGAAGGCATGCTGGCCTACGTCAAGGGCGTTCAGCGTCAGGAACTGCGCCAGGGCATCGCCTGCGTCAAGCACCAGAACATGGCT GGCTCCGACATCGGCGACAACCACAAGGAGTACTTCGCTGGCGAAGCGGCTCTGAAGGCAAGCGGTAAAGACAACACCATGAACCAGTTCCACTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCGGAGCGGTTTGCCGCCTGGCCTTCGGGCCAGGCAGGCGCTGATACGAGAGCCCCGGCATTCGCCGGGGCTTTTTTCGTTTGAGCTTCATGAACTTCGC CGACGCAACGGCACTAGGGTCTGTTCCCGTTTCGTACGCGTCCGCGCCGGAGTCTAGGCAGCGCTTTCATTCCCCGGCGAGGTAAACAGTCCCCACGCCG AGATGAACAAGGCAGCGATCAGCGGACCGATGACGAACCCGTTCAGCCCGAACAGGCTCAAGCCGCCGAGCGTGGAAATCAGCACCACGTAGTCCGGCAT CTTGGTGTCCTTGCCCACCAGGATGGGACGCAGGATATTGTCGACCAGACCGATGACCAGCACGCCGTACAGAATCAGGATCACGCCCTGTACGATGAGG CCTTTCATCAGGAAATAGATCGCCACGGGCGTCCAGATTACCCCGGCGCCGACGGCAGGCAACAACGACAGGAAAGCCATCAGCACACCACAGAGCACCG
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| Amino Acid Sequence |
>isocitrate lyase
MSAYQNDIKAVAALKEVAGSSWSAINPESVARMRAQNRFKTGLEIAQYTADIMRKDMAEYDADSSVYTQSLGCWHGFIGQQKLISIKKHLKTTNKRYLYL SGWMVAALRSEFGPLPDQSMHEKTAVSDLIEELYTFLRQADSRELDLLFTALDAAREAGDKAKAAEIQSQIDNYETHIVPIIADIDAGFGNPEATYLLAK RMIEAGACCIQIENQVSDEKQCGHQDGKVTVPHADFLAKIAAVRYAFLELGIDNGVIVARTDSLGAGLTKQIAVTKEPGDLGDLYNSFLDCEEITEAELG NGDVVIKREGKLLRPKRLPSNLFQFRKGTGEDRCVLDCITSLQNGADLLWIETEKPHVGQIKAMVDRIREVIPTAKLVYNNSPSFNWTLNFRQQVFDAFV AEGKDVSAYDRAKLMSVEYDETELAQVADEKIRTFQKDGSAHAGIFHHLITLPTYHTAALSTDNLAKGYFAEEGMLAYVKGVQRQELRQGIACVKHQNMA GSDIGDNHKEYFAGEAALKASGKDNTMNQFH
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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