Pseudomonas stutzeri DSM 10701, PSJM300_11190
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0022857 | transmembrane transporter activity |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01845
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Molecular Function | GO:0015562 | efflux transmembrane transporter activity |
Inferred from Sequence Model
Term mapped from: InterPro:PF02321
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Biological Process | GO:0055085 | transmembrane transport |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01845
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Cellular Component | GO:0016020 | membrane |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01845
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Gene3D | G3DSA:2.20.200.10 | Outer membrane efflux proteins (OEP) | - | - | 94 | 342 | 5.7E-120 |
| Coils | Coil | Coil | - | - | 220 | 240 | - |
| NCBIfam | TIGR01845 | JCVI: efflux transporter outer membrane subunit | IPR010131 | RND efflux system, outer membrane lipoprotein, NodT | 8 | 457 | 1.7E-103 |
| Pfam | PF02321 | Outer membrane efflux protein | IPR003423 | Outer membrane efflux protein | 275 | 455 | 5.2E-20 |
| Pfam | PF02321 | Outer membrane efflux protein | IPR003423 | Outer membrane efflux protein | 58 | 246 | 4.3E-26 |
| Gene3D | G3DSA:1.20.1600.10 | Outer membrane efflux proteins (OEP) | - | - | 49 | 457 | 5.7E-120 |
| Coils | Coil | Coil | - | - | 422 | 442 | - |
| Coils | Coil | Coil | - | - | 136 | 163 | - |
| SUPERFAMILY | SSF56954 | Outer membrane efflux proteins (OEP) | - | - | 1 | 459 | 1.06E-102 |
| PANTHER | PTHR30203 | OUTER MEMBRANE CATION EFFLUX PROTEIN | - | - | 7 | 461 | 1.3E-90 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.