Pseudomonas aeruginosa AZPAE14809, NR28_RS07180
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE14809 AZPAE14809_contig_9, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGTCCTCGCCCTGCAAGACGTGACTGGCTTTGAACATCACGCCCTCCTCTTGTGGAGCCATTGTTATTGAAAGAAGTCCGGCCAGGCGTCCATTGCCCGG GGCACCGCCGCCGGCGGGTTGTGCCGGCGGCGCGGCACGTCCTGTGGCGCGGGAATACGGATCAGTATGGGTCAGGCCCATTCCGCCGGCGCGAGGCACC AGCGGATAGCGGAATGTAGTGGCTGCGAGAGGGGCGATTCTTGCGAAAGACTCTGGAGTTTTTGCGGAAAACTCCTGGCTGCGGAACTTTCCCGTTCCTC TTCGCCGGCAGGCATGCGGACATTGCCGCTGCACGTCGGCACGACGCCATGCAGAGTGGCTACGCGGGTCTACCGACACAAAAAGAAATAATATAACATC CCAATAAATACGCCGATCCGACCCCGTCGCCCTTCCTCCGGGAAGGGCCTGGGTTCGCTTTGGCCTGAAAAAAGTCCGACCCATGACCATGGAGCCCGCA
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| DNA Sequence for Gene |
>NR28_RS07180
ATGTCCTCTTCCGGCCTTTTCCCTTCCCGTCCGCTCTGGCCTCTCACGCCACTGGCGCTGGCCTGCCTGATTGTTTCGGGGGAAACGCTCGGCGCCGACG GCCGCCCCAGCGAATTGCCCTCCCAGGTGATCACCGCCAACCCGCTGGGCAACGAATCTCCCGCCACGCCCAGCAGCGTGCTCGAAGGCGACGAGCTGAC CCTGCGACAGAAAGGCAGCCTCGGCGAAACCCTCAACGGCCTGCCCGGGGTGTCCTCCACCTACTTCGGACCGGGCGCCAGCCGACCGGTGATCCGCGGC ATGGACGGTGATCGCATCCGCCTGCTGCGCAACGGCGTCGGTGCGCTCGACGCCTCGTCGCTGTCCTACGACCACGCGGTGCCGGAAGACCCCAACAGCG TCGAGCGCCTGGAAGTGGTACGCGGCCCGGCCGCCCTGCTCTACGGCGGCAATGCCATCGGCGGGGTGGTGAACAGCTTCGACAACCGCATCCCCAGCGA ACCCGTCGACGGCATCCACGGCAGCGGCGAACTGCGCTACGGCGGCGCCGACACCACCCGTAGCCGCTCCGGCGCACTGGAGGCCGGCGACGGCAACTTC GCCCTGCACGTGGACGCCGCCAGCCGCGAGTTCAACGACGTCAGGATTCCCGGCTACGCCCATTCCAGCCGCCAGCGGCAGATCGACGGCGACACCGGCA AGCATCGGGTGCAGAACAGCGACGACCGCCAGGACGGCGGCGCCGTCGGTGGCTCCTATCACTGGGAGCACGGTTACGCCGGCCTCTCCTACAGCGGCTA CGACAGCAACTATGGCTCGCCGGCCGAGGACGACGTGCGCCTGAAGATGCAGCAGGACCGCTACGCCTTCGCCTCCGAGATCCGCGACCTCGAAGGCCCG TTCACCTCGCTGAAGCTGGACGCCGCCTATACCAAGTACGAGCACAAGGAAATCGAGGACGGCGAGACCGGCACCACCTTCAAGAACGAAGGCTACGAAG GCCGCATCGAGGCCCGCCACCGCCCGCTCGGCCCGCTGAACGGGGTGGTCGGCGCGCAGTTCGCCAACAGCCGCTTCTCCGCCCTCGGCGAGGAAGCCTT CGTGCCGCACACGGAAACCGACAGCGCCGCGCTGTTCGCCCTGGAGGAATGGAAGCTCAGCGACCGCCTCGACCTCAGCTTCGGCGCCCGCCTGGAGCAC ACCCGCGTGGACCCCGACGCCAAGGGCAACGAGCGCTTCGCCGAGAACGACGGTTCGCAGAGCTTCACCACCGGCAGCCTGTCCACCGGCGCGGTGTACA AGCTGACGCCGATCTGGTCGCTGGCCGCCACCCTCAGCTACACCGAGCGCGCCCCGACCTTCTACGAGCTGTACGCCAACGGTCCGCACGCCGCCACCGG CACCTACGAGGTAGGCGATGCCGACGCGGACAAGGAAAAGGCGGTCTCCACCGACCTCGCCCTGCGCTTCGACAACGGCGTGCACAAGGGCAGCGTCGGG GTGTTCTACAGCCGCTTCTCCAACTACATCGGCCTGCTCGCCAGCGGTCGCCATCGCAACGAGGAAGGCGAAGTGGTCGCCGCCGGCGATGACGAGGCGC TGCCGGAATACCTCTACAGCGGCGTTCGCGCGGACTTCTACGGCGTCGAGGCGCAGGACCGCATCCACCTGCTGGAAAGCCCGTACGGCAACTTCGACCT GGAACTCTCCGGGGACTACACCCGCGCCAAGAACAAGGACACCGGCGAACCGCTGCCACGCATCGCCCCGCTGCGCCTGAACACCGCGCTGATCTGGGAG TTGCAGCAGTGGCAGGCGCGGGTCGACGTCGAACACGCCGCCTCGCAGCACCGCGTGCCGGAGGAAGAACTCTCCACCGACGGCTACACCACCCTCGGCG CCAGCCTCGGCTACAACTTCGACCTCGGCGAGAGCCGCTGGCTGGCCTTCGTCAAGGGCACCAACCTGACCAACCAGACCGTGCGCTACGCCAGTTCGAT CCTGCGCGACCGGGTGCCGGCGGCGGGACGCGGCATCGAGGCGGGGGTGAAGGTGGCGTTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GACAGGCCGTGCGGGACGAATTCGCTCGGCGGATGACGTCCGCGCCGTTATCCGTCCTACACCACTCCCGGTAGGGCGAATAACCGCCTGCGGTTATCCG CCGAAGGTGGCGGATGGCGCTCAGCCCTTGCGCAGCGACTTCGGCGTCAGCCCCAGGTAGCGGCGCATCGCCGTGGTCAGCGCGCTCTGGCTGGAGAAGC CGCATTCCTCGGCGATCCGCACCAGAGGCAGGCGGCTTTCCCGCAGCAACCGCGCGGCGCAGTCGAGGCGGACCTTGAGCAGGTACTGGTGCGGGGTCAG GCCGACGCTGTCCTTGAACTGCGCGTGGAAATGGCTCGGGCTGAGACAGGCGACCTGGGCCAGTTCGGCGACCGTGATGCGCCGCGCCAGGTTCCGCACG ATATGCGCGTCCAGGCGCTCCAGGTCGAGCGGCCCGCTGGCCGCCAGGGGCTGCTGCTCGCCGAACAGGCGCAGGTGCAGGGCGCGGATCAGCACTCCGC
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| Amino Acid Sequence |
>TonB-dependent receptor
MSSSGLFPSRPLWPLTPLALACLIVSGETLGADGRPSELPSQVITANPLGNESPATPSSVLEGDELTLRQKGSLGETLNGLPGVSSTYFGPGASRPVIRG MDGDRIRLLRNGVGALDASSLSYDHAVPEDPNSVERLEVVRGPAALLYGGNAIGGVVNSFDNRIPSEPVDGIHGSGELRYGGADTTRSRSGALEAGDGNF ALHVDAASREFNDVRIPGYAHSSRQRQIDGDTGKHRVQNSDDRQDGGAVGGSYHWEHGYAGLSYSGYDSNYGSPAEDDVRLKMQQDRYAFASEIRDLEGP FTSLKLDAAYTKYEHKEIEDGETGTTFKNEGYEGRIEARHRPLGPLNGVVGAQFANSRFSALGEEAFVPHTETDSAALFALEEWKLSDRLDLSFGARLEH TRVDPDAKGNERFAENDGSQSFTTGSLSTGAVYKLTPIWSLAATLSYTERAPTFYELYANGPHAATGTYEVGDADADKEKAVSTDLALRFDNGVHKGSVG VFYSRFSNYIGLLASGRHRNEEGEVVAAGDDEALPEYLYSGVRADFYGVEAQDRIHLLESPYGNFDLELSGDYTRAKNKDTGEPLPRIAPLRLNTALIWE LQQWQARVDVEHAASQHRVPEEELSTDGYTTLGASLGYNFDLGESRWLAFVKGTNLTNQTVRYASSILRDRVPAAGRGIEAGVKVAF
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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