Pseudomonas stutzeri DSM 10701, PSJM300_10370
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:0006355 | regulation of transcription, DNA-templated |
Inferred from Sequence Model
Term mapped from: InterPro:PF09339
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ECO:0000259 match to InterPro signature evidence used in automatic assertion |
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| Molecular Function | GO:0003677 | DNA binding |
Inferred from Sequence Model
Term mapped from: InterPro:PF09339
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Gene3D | G3DSA:1.10.357.10 | Tetracycline Repressor, domain 2 | - | - | 2 | 182 | 4.6E-25 |
| PANTHER | PTHR30055 | HTH-TYPE TRANSCRIPTIONAL REGULATOR RUTR | - | - | 9 | 180 | 3.6E-10 |
| FunFam | G3DSA:1.10.357.10:FF:000022 | Transcriptional regulator NfxB | - | - | 5 | 183 | 1.2E-90 |
| Pfam | PF09339 | IclR helix-turn-helix domain | IPR005471 | Transcription regulator IclR, N-terminal | 21 | 46 | 9.9E-5 |
| SUPERFAMILY | SSF48498 | Tetracyclin repressor-like, C-terminal domain | IPR036271 | Tetracyclin repressor-like, C-terminal domain superfamily | 81 | 165 | 4.45E-9 |
| SUPERFAMILY | SSF46689 | Homeodomain-like | IPR009057 | Homeobox-like domain superfamily | 8 | 66 | 9.48E-7 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.