Pseudomonas aeruginosa AZPAE14809, NR28_RS14190
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa strain AZPAE14809 AZPAE14809_contig_13, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CAGTCCGCTCGCGCGTTTTCTGGTCTTGGGAGGCGTCGACAGTAATCCAGGAAAGGTTTCACGGGAAGAAATGAACCAGTGGGTAGCCGAAGGCTTGTTG GAGTGGCCTGGCCATGTGCATGACATCAAGGCCTGGGTGGCCAATACGAGTGTATTCGTGCTGCCATCCTATTATAGAGAAGGTGTGCCGAGAAGTAGTC AGGAGGCCATGTCCCTGGGGAAGCCTGTGATAACGACCAACTGGACGGGATGTCGTGAAACGGTACTGGATGGTGTCAATGGGTTTCTGGTACCGATCAA GAGTCCGCAGAGTTTAGCCGCGGCAATGTTGAAGTTTATCGAGTCGCCTTCGCTCATCGCACGTATGGGAGAAGCCAGTAGATCGCTGGCAGAACAGCGC TATGACGTTTTCAGGATAAACAATACGATGCTTTCTGCGTTGTAGGGATCTGGCTGTGAGTTGTATGAAGGGTAATGCACCGGTACTTGCGGCCGTAGAT
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| DNA Sequence for Gene |
>NR28_RS14190
ATAAGCAAGGGTTTTAGAGTCTACAGGGCTCCTCATCAAAGGATGTTGCAGGCCATCTGGGGTGAGAGAAAGAAGTTTTATTCGGAGTTCTGGGCTCTGC GGAATGTGAGTTTCCAGGTTTTTCCTGGGGAGGTGGTTGGAGTAATCGGCTGCAACGGCTCCGGGAAGTCCACCTTGCTGCAGATACTTGCGGGTACCTT GCGCCCTACGAGTGGACAGGTGGTTCGCCCAGAAAGGGTAGCGGCATTGTTGGAGCTGGGGGCCGGTTTCAACATGGAGTACACCGGCAGGGAAAACATA ATCTTCAATGCCATGCTTCTTGGACTGGGCGAGCAGGAGATTTCTGAACGCCTAGACGAGATAATCCAGTTTGCCGATATCGGTGAGTTCATCGATCGTC CGGTTAGAACATATTCGAGCGGTATGTTCGTGCGTTTGGCTTTCTCCATTGCGGCATATGTCGATGCCGATGTGCTGATCGTGGACGAGGCCCTGGCGGT AGGTGACGCCGCGTTTCAGTTCAAATGCCTGAACCGGCTTGAAGAACTGCTGCTGAAAGGCATCACCATCCTGCTGGTCTCCCACGATATACAGTTGATC AAGAGCTATTGTAGTCGAGCGATCTATCTATCCAAAGGTAGAGTGATATTCGATGGCGACTGTGAAACAGCCACGGAACTCTATCTGCGGGACAGTATAG AGACACAGCGGGCGGAAGTCCGCTCAGGAAGCCTGATCGCTTCTGGCGAACACGGGAACTCGGGAATTGCATATGGAAATGGGCAGGGCAGGTTTCTATC CATCCGCATGGGCGTACTTGACGAAGCCCGGGATTACTTCGATTCGGGCGAACGTGTCTGGGTCGAGGTACTTGTGCAACTTGACCTACCCGTCCCGGAG CACCCAAAGATCACCCTGACTATCCGTGACCAGCGCGGTTACAACCTCTATGGAATAAACAATTTATTGCTGGGCAAGGCTCTGAATGTCGAGCCTGACG GGCGCTTGAGAACACGTATCAGCTTCGACTGCGACTTGCAGGCCGGCGAATACGCCTTGACGTTTCGTCTGGAGAACTCTTTGTCGGAGTCCGTTTGCGA ACTCATGGATAAACAGGTCAATGCGGCGATATTCAGGGTCTTCAATTCGCCCAAGTGCTTCGATGCAGTGGTGAATCTGCATGGAGCATTCGAGCCGGTT CCGTTCTGCTGCGAGACCCGGGCTACCCAATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AGTCATCGTCTTTGACCATGGTATTCGTCGTCCACGCCGGCGAGCTGGAAATCAAGTCTGCCGTGTTGGCGGCTTCTCTACGCAAACGCTTTGGCTTTTC CATGGATATCATTGCTGCATGTCCATCGGGAAAGGCTGACTGGGGTGTGCCAAGCGATGCATCCCGGCGCTTATATGAGCGTTTGGGCATTCCTCTTTTG CCTATGGATAGTCCTTTCGGGCCAGCGTATCCAATAGGCAACAAGTTCGCGGCGTTGGCGCTGGGGCCGGCTGTTGGGCATACGTTGTTTCTCGACAGTG ACATGATCTGTGTCGATGCATTCGAAGCTGACATGCTTTGTCGTTTCGATGCGGCACTCAAACCTGCCGATATGGCATTGGTGGCAAAACAGAACGATTA CTGGCAACGCATATACGCCCATGCGGGATCGGCATTGCCTGGAGATCGGGTAGTGACCACTTGTTCCGGGGAAGCGATGCCTGCGTACTATAACGCTGGC
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| Amino Acid Sequence |
>ABC transporter ATP-binding protein
MSKGFRVYRAPHQRMLQAIWGERKKFYSEFWALRNVSFQVFPGEVVGVIGCNGSGKSTLLQILAGTLRPTSGQVVRPERVAALLELGAGFNMEYTGRENI IFNAMLLGLGEQEISERLDEIIQFADIGEFIDRPVRTYSSGMFVRLAFSIAAYVDADVLIVDEALAVGDAAFQFKCLNRLEELLLKGITILLVSHDIQLI KSYCSRAIYLSKGRVIFDGDCETATELYLRDSIETQRAEVRSGSLIASGEHGNSGIAYGNGQGRFLSIRMGVLDEARDYFDSGERVWVEVLVQLDLPVPE HPKITLTIRDQRGYNLYGINNLLLGKALNVEPDGRLRTRISFDCDLQAGEYALTFRLENSLSESVCELMDKQVNAAIFRVFNSPKCFDAVVNLHGAFEPV PFCCETRATQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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