Strain | Pseudomonas aeruginosa strain AZPAE14809 AZPAE14809_contig_13, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGGAGCCCTTCGAGTGCCTGCTGTTCGACGTCGCCGGGCTGACCCTGGCGGTGCCGCTGGTGTGCCTCGGCTCGATCTATCCGCTGGAGAACCAGGAACT GACCCCGTTGTTCGGCCAGCCCGACTGGTTCCTCGGCATCCTGCCGTCGCAGGCGGGCAACCTGAAGGTGTTGGACACCGCACGCTGGGTGATGCCCGAA CGCTACCGCGACGACTATCGCGACGGCCTCAAGTACGTGATCTCGGTCCAGGGCTACGAGTGGGGGCTGGCGGTGCACCAGGTGAGCCGCTCGATCCGCC TCGACCCGGCCGAGGTGAAATGGCGCAGCCAGCGTAGCCAGCGGCCCTGGCTGGCCGGCACGGTCATCGAACACATGTGTGCGCTGCTGGATGTGGCGGC GCTCGCCGAACTGATCGCCAGCGGCGCCGTCAAGCGCCTGCACGGCGACCATTGATAGACAGCTTCCGCCACTTGCGGCGGTTTTCGAGAGGTTAGGGGA
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DNA Sequence for Gene |
>NR28_RS13805
ATGAGCAAAGCCACCGCGCAAAGCGCCGAAGATCCGATCCTGCAGTGGGTCACCTTCCGCCTGGACAATGAGAGCTACGGCATCAATGTGATGCAGGTCC AGGAGGTGCTGCGCTACACCGAGATCGCCCCGGTGCCGGGCGCGCCGAGCTACGTGCTGGGCATCATCAACCTGCGCGGTAACGTGGTCACGGTGATCGA CACCCGCCAGCGCTTCGGCCTGGACCCTGCGCCGGTCAGCGACAACACGCGGATCGTCATTATCGAGGCGGACAAGCAGGTGGTCGGCATCCTGGTCGAC AGCGTCGCCGAGGTGGTCTACCTGAAGCAGTCGGAAATCGAGACCGCGCCGAACGTCGGCAACGAAGAGTCGGCCAAGTTCATCCAGGGTGTCTGCAACA AGAACGGCGAGCTGCTGATCCTGGTCGAGCTGGACAAGATGATGACCGAGGAAGAATGGTCGGAGCTGGGCAGCATCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TGCGTTCTACCGACACGAGGGCCTGCTGAGATGGAGGTCGTCGCGCTGGCACTGGCGCTCGCCGCCTGCCTCGGCCTGGCGGCGGCGTGCCTGTGGCTGC GCCGTGAATTGCGCCGCCTGCAAGCTGCGCTGGCGCAGCAGGCGGAGGAGGGCGCCGCGCGCGAGCGCCGGCTCAAGGAGCTGAGCAAGCGCATCCAGTC CTACCAGCAGGTCAACGTGCGCATGGGCGAGGCCTTGCAGGACCTCGGCAAGCAACTCGCGCCGCTTCCCGACCGGGTCGCGCGCCTGGAGCAGCGCGAT CCGACCACGCTGTCGTTCAGCCAGGCCGCACGCCTGGTCGGGCTCGGCGCCAGCGCCGAAGACCTGACCCAGGCCTGCGGTCTGTCGCAGGCCGAGGCCG AGCTGGTGGCGCGCCTGCACGAAGCCAAGGGCAAGTGACGGTCGCCGGCCCGGCGCTGGCGCTTTTCAGGCGAGCAGGCGGCTCGCCACTTCTGCCAGTG
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Amino Acid Sequence |
>chemotaxis protein CheW
MSKATAQSAEDPILQWVTFRLDNESYGINVMQVQEVLRYTEIAPVPGAPSYVLGIINLRGNVVTVIDTRQRFGLDPAPVSDNTRIVIIEADKQVVGILVD SVAEVVYLKQSEIETAPNVGNEESAKFIQGVCNKNGELLILVELDKMMTEEEWSELGSI
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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