Strain | Pseudomonas aeruginosa strain AZPAE14809 AZPAE14809_contig_11, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GTCGAGTCGTCGCAGTGCTGGGTCATGTAGCCGACCACGGCGAGGGTGTCGATACCGCGCTCGCGCAGCCAGTCGGCCAGCCCGGTGCCGACGAAGGAAC TGGCCAGTTGCTTTTCCACCTTGTGCTGGTAGGGCCGCGAGGCGACCACCTCGTGCAGCTCGGCCTGCCGGCTGCCGAGCGCGAACAACGGCGAGTCCGC CGGTGCCAGGTGCTGCACCACGACGATCGGGATGCCCGCCGCGTGGGCGGCATCCATGGCGGCGCCGATGCGTTCCAGCGACGATTGGATGGCGGGAAAT TCGATACGCAGGTTGCCGCTGACGTATTCGTTCTGTACGTCGATGACCAGCAAGGCGCGTTTGGGTTGACGTGCGGGCATGGCGTTTCCTCCTGAGTGGG TGAGGCAGATTCTGGTCCCGGCGCGGCGTAGCGAGTGAGTGGCCTGAGAGACAACTTTCGCTAGAATCGGGCCAACCCGCTCATACCCACCGAGGTGTGC
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DNA Sequence for Gene |
>NR28_RS09045
ATGTCCCGCCAGTCCGTGGCCGTGGTGGCCTTCGACCGCATCAGTCCGTTCCACCTGTCGGTGCCCTGCCTGGTGTTCGGCCAGGAGTGCTACGACCCCT GCGCGCAGGCCTTCGACCTGCGTGTCTGCACCGCCGAGCCGGGCCGGCTGCGAACCACGGTGGGGTTCACCATCGAGGCCGAGGCCGGGCTGGAAGCGCT GGCCGAGGCGCAGACCGTGATCGTGCCGAGCTGGCGCGATCCACACGAGCGTCCGCCACAAGCGCTGCTGGATGCGTTGATCGCGGCCCGTGCACGCGGT GCGCAACTGGTGGGCTTGTGCCTGGGGGCCTTCGTGCTGGCCGAGGCCGGGTTGCTCGACGGTCGCCGCGCCACCACCCACTGGATGTGGGCGGAGGATT TCGCCGGGCGCTTCCCTGCGGTGCGGGTGGAGCCCGACGTGCTGTACATCGAGGACGACGGCCTGCTGACCTCGGCAGGCACCGTCGCCGGCATCGACTG CTGTCTGCACCTGGTCCGCCAGCGGCTCGGTGCGCAGACTACCAATCACCTGGCCCGGCGCCTGGTGGTGGCGCCGCATCGACAGGGCGGCCAGGCCCAG TTCATCGAGCAGCCGCTGCCGGACAGTGCCCAGGACGGCCGTCTCGGCGAGCTGCTGGTGTGGCTGCGGCAGAACCTCGACCAGGCGCACAGCCTGGACA GCCTGGCACAGCGGGTGCTGATGAGCCGGCGGACCTTCACCCGGCATTTCCGCCAGCTCACCGGCACCACCGTCAACCAGTGGCTGCAGGCCGAACGCCT GGCCCTGGCCCAGCGCCTGCTGGAAACCACCGAGCATTCGGTGCAGGCGATCGCCGGGCTGGCCGGCTTCGGTTCGGCGGTGTCGTTGCGCCAGCAGTTC TCCGCCGCGTTCGGCCTGCCGCCGCTGGGCTACCGGCGCGCCTTCGCCTCCTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TCCGCCGGCGGGCGCTTCTGCAACTGCTGGCGCCAGAGCGCGTCCATCGCCTGCAACTGCACCGGGCCGAACAGCGCCTGCGTCGCGCCGGTGTGCCAGG CCCAGAGCTGGTCGCCGAAATCGTAGTGCCACCATTCGCTGGGCAGGTTGCTGAAACCGGCGTCGAGCATCGCGTGATAGAGCAGGCGACGGTGATCGCG GACGCGTCGCTGGCGCGTGTCGGGCTCCGCCAGGCGTTCGAAGTAGGCGGTGTAGGAGGCCGGCACGGCTTCGTCGAAGGCGCTGCCCATGTCCAGCCAG CGGCCCTGGGCGTCGCACAGGGTGACGTCCACCGCGCCGCCGGTGAGATGCGGGCTGGGCGCCTCGCGGCTGCTGCTCGGCGGCGAGACGAACTGGCGGG TGAGCCGTTCCAGCTCGGCCTCGCCGGCCCGTGGGTAGTGCGCGGCCAGGGCGCTGGACAGGCTGTCGTAGAGATACTGCTGCACGGCGAACGGCCGCCA
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Amino Acid Sequence |
>AraC family transcriptional regulator
MSRQSVAVVAFDRISPFHLSVPCLVFGQECYDPCAQAFDLRVCTAEPGRLRTTVGFTIEAEAGLEALAEAQTVIVPSWRDPHERPPQALLDALIAARARG AQLVGLCLGAFVLAEAGLLDGRRATTHWMWAEDFAGRFPAVRVEPDVLYIEDDGLLTSAGTVAGIDCCLHLVRQRLGAQTTNHLARRLVVAPHRQGGQAQ FIEQPLPDSAQDGRLGELLVWLRQNLDQAHSLDSLAQRVLMSRRTFTRHFRQLTGTTVNQWLQAERLALAQRLLETTEHSVQAIAGLAGFGSAVSLRQQF SAAFGLPPLGYRRAFAS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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