Pseudomonas stutzeri DSM 10701, PSJM300_04785

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0004252	serine-type endopeptidase activity	ISM Inferred from Sequence Model Term mapped from: InterPro:TIGR02037	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0006508	proteolysis	ISM Inferred from Sequence Model Term mapped from: InterPro:TIGR02037	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0005515	protein binding	ISM Inferred from Sequence Model Term mapped from: InterPro:SSF50156	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	psj02020	Two-component system	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	psj01503	Cationic antimicrobial peptide (CAMP) resistance	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
NCBIfam	TIGR02037	JCVI: Do family serine endopeptidase	IPR011782	Peptidase S1C, Do	28	464	0.0
Gene3D	G3DSA:2.40.10.120	-	-	-	27	259	2.8E-85
CDD	cd00987	PDZ_serine_protease	-	-	266	355	8.72983E-23
PANTHER	PTHR22939	SERINE PROTEASE FAMILY S1C HTRA-RELATED	-	-	27	357	1.1E-97
PRINTS	PR00834	HtrA/DegQ protease family signature	IPR001940	Peptidase S1C	164	188	7.2E-54
Pfam	PF13365	Trypsin-like peptidase domain	-	-	94	227	1.1E-34
SMART	SM00228	pdz_new	IPR001478	PDZ domain	266	348	9.6E-15
Pfam	PF13180	PDZ domain	IPR001478	PDZ domain	268	355	4.6E-14
FunFam	G3DSA:2.40.10.120:FF:000007	Periplasmic serine endoprotease DegP-like	-	-	28	259	1.5E-99
PRINTS	PR00834	HtrA/DegQ protease family signature	IPR001940	Peptidase S1C	306	318	7.2E-54
Pfam	PF02163	Peptidase family M50	IPR008915	Peptidase M50	231	379	1.1E-8
PRINTS	PR00834	HtrA/DegQ protease family signature	IPR001940	Peptidase S1C	124	144	7.2E-54
Gene3D	G3DSA:2.30.42.60	-	-	-	366	468	4.3E-18
Pfam	PF13180	PDZ domain	IPR001478	PDZ domain	380	460	4.6E-9
PRINTS	PR00834	HtrA/DegQ protease family signature	IPR001940	Peptidase S1C	103	115	7.2E-54
PRINTS	PR00834	HtrA/DegQ protease family signature	IPR001940	Peptidase S1C	198	215	7.2E-54
SMART	SM00228	pdz_new	IPR001478	PDZ domain	378	457	2.4E-9
CDD	cd00987	PDZ_serine_protease	-	-	379	464	4.00259E-17
SUPERFAMILY	SSF50156	PDZ domain-like	IPR036034	PDZ superfamily	379	466	8.94E-14
SUPERFAMILY	SSF50494	Trypsin-like serine proteases	IPR009003	Peptidase S1, PA clan	5	275	7.36E-70
Gene3D	G3DSA:2.30.42.10	-	IPR036034	PDZ superfamily	264	365	2.0E-25
PRINTS	PR00834	HtrA/DegQ protease family signature	IPR001940	Peptidase S1C	220	237	7.2E-54
SUPERFAMILY	SSF50156	PDZ domain-like	IPR036034	PDZ superfamily	235	360	9.58E-22

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.