Pseudomonas stutzeri DSM 10701, PSJM300_04295
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri DSM 10701 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GGCCATCAGTTGCGCCTGGGGGAATTCGCGCATCTTCAGCATGTACTCGATCGGCTCGCCGGCACCATCCAGTTGGGGCGCCTCGACGCTACCGGTAATC GGCAGCACTTCTAGATAAAGGTCGGCCGCCAGGCGCTGGTTCAGGCGCAGTTCTTCCTCGCAGAAGTGTTTGCGGGCGCTCAGCTCGGTGAAGTCGAGGA AGCCGAAATCGACCGGCTTCTTGAGCTTGTAGGCATAGGTGCCGGTCAGGATGATCCAGGAAATATGCGTCTCGATGACCTGGAAACCATCCACCGGATG CGGGTATAGGGCTGGGTTCTGCAGCGCGGCGATCAATGCTTGGCTCACGGTCATTCCTTGTGGATATTGTTGGACGGGCCTATGCGCTGCGACGCAGCTC ACAGAGTCGGAAAATGCGCCATTATGGCCGTACATGGATGTTGTGCAAACCGCCGAGAGGCCGTCTGCCGGCGAAATCAAAGTGCGTATAATGCGCCGCC
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| DNA Sequence for Gene |
>PSJM300_04295
ATGACTAAAGCACGCTCCCCCCGTACCCGCTCGAAACGCCGCTCCGGCCCGGCTCGCCCCTGGTTGGGCTGGCTGCTCAAACTGTCTATCGTGGCGCTGG TTCTGCTGGCTGGCATGGCCATTTATCTCGATGCCGTGGTGCAGGAGAAGTTTTCCGGCAAGCGCTGGACCATCCCGGCGAAGGTCTACGCCCGGCCGCT CGAATTGTTCGTCGGACAGAAACTGGACAAGGACGATTTTCTCGCCGAGCTCGGCGCCCTCGGCTACCGCCGCGAGAACGCGGTGAGCGGACCCGGTGGC GTTTCGGTTGCAGGCAGCAATGTCGAGCTGCATACCCGTGGTTTCCAGTTCTACGAAGGGGCCGAGGAGTCCAGGCGGTTGCGGGTGCGCTTCTCCGGTG ACTTCGTCGCCGGCCTGTCGGCAGTCGGCGGTGGCGAGCTGCCGGTGGCGCGACTGGAACCGGTGACCATCGGCGGGCTGTATCCGGCGCACAACGAAGA CCGGATCCTGATCAAGCTCGATCAGGCGCCACCCTATCTGATCGAGACGCTGGTTGCCGTGGAGGACCGTGAGTTCTTCGAGCACTTTGGCGTTTCACCG AAATCCATCGCCCGCGCCGTCTGGGTCAACCTGACGGCCGGCCAGGTACGCCAGGGTGGCAGTACCCTGACCCAGCAACTGGTCAAGAACTTCTACCTGA CCAACGAACGCAGTCTCAGCCGCAAGGCCACCGAAGCGATGATGGCGGTTCTGCTGGAGTTGCACTACGACAAGCAGGAGATACTGGAGGCCTACCTGAA CGAGGTATTTCTCGGGCAGGACGGGCGCCGCGCCGTGCATGGTTTCGGTCTGGCGAGCCAGTACTTCTTCGGCCAGCCGCTGGCGGAGCTGAAGCTCCAT CATGTGGCGCTGCTGGTCGGGATGGTCAAGGGACCGACCTATTACAACCCGCGCCGTCATCCGGAGCGCGCATTGAATCGCCGCAACCTGATCATCGACC TGCTGGCCGAGCAGCAGGTGATCACGCCCGAAGAGGCCGCGGCAGCCAAGAGCAAACCGCTCGGCATCACTCAGCGCGGCAGCCTGGCCGACAGCTCGTA CCCGGCCTTCCTCGATCTGGTCAAACGCCAGTTGCGTGAAGACTATCGGGAGGAGGATCTGACCGAAGAAGGTTTGCGTGTCTTCACCAGCTTCGACCCG ATCCTGCAGCTGAAAGCCGAGGCGGCCATGAGCGAGACGCTCAAGCGTCTGGGCGGCAAGGCGACGGCCGAGATCGAAGGGGCGATGGTGGTCACCAATC CCGAGACCGGGGAAATCCAGGCGATGCTGGGCAGTCGCCAGCCCGGCTATGCCGGATTCAACCGGGCCCTGGATGCGGTGCGTCCGATCGGTTCGCTGAT CAAGCCGGCCATCTATCTGACCGCGCTCGAGAGACCCAGCCAGTACACCCTGACCAGTCTGCTCGAGGACGAACCCTTTTCGGTCAAGGGCGCCGACGGG CAGGTCTGGAAACCGCAGAACTACGGACGCAACGCCCACGGCACCGTCTACCTGTACCAGGCGCTGGCCAACTCCTACAACCTGTCCACGGCTCGTCTCG GGCTGGATCTGGGCGTGCCCCAGGTGCTCAAGACCCTCGGCCGCCTCGGCGCCTCGCCCGATTGGCCCGCCTATCCCTCGATGCTGCTGGGCGCCGGCGG CTTGCGCCCGATCGAGGTCGCAGACATGTACCAGACCTTGGCGAACGGCGGCTTCAATACCCCCCTGCGCGGTATTCGCAGCGTGCTGACTGCCGGCGGA GAGCCGCTCAAGCGTTATCCGTTCCAGATTCAGCAGCGCTTCGATCCCGGCGCCATCTACCTTACCCAGTACGCCATGCAGCGCGCCATGCGCGAAGGTA CCGGTCGTTCGGCTTACAACCGGGTGTCGCAATCTCTTGCGCTGGCAGGCAAGACCGGCACCACCAACGATTCGCGTGACAGCTGGTTCGCCGGTTTCAG TCAGGATCTGCTGGCGGTGGTCTGGCTGGGGCGCGATGACAACGGCAAGACCTCGCTGACCGGTGCCACCGGTGCGCTGCAAGTGTGGTCCGACTTCATG CGCCGCGCGGACCCGTTGCCCTTGAACATGCCGGTTCCGGACAATGTCGTGCATGCCTGGGTGGACGCGGAAACGGGGCTCGGAACGGATGAACGCTGCC CTGGCGCCGTGCAGATGCCCTATATTCGCGGCAGCGAACCTGGGCCAGGGCCGGGTTGTGGCATTCAGGCGCCGGCCGAATCGGTGATGGACTGGGTCCG TGGCTGGTTGCAGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CAGGGCGGGCGCGCGTTGAACATATTGACGAAGCAGCAGCTTGCGAGAGGTTGAACAATTGAACAAGCAATGGATGGGCATCCTGATCGCCGCCACGCTG GTGCAGGGTTGCGCGACGGTGGACAGGGGCGCGATCCCGGTGGTCGACGCCGGCGCGCCGGTGTCCGAGGAGACTGCCGGGCGCCAGGCGTACCGAGCGC CTGCGCCCGTTGTCGCTCAGCCGAGCTACGAGGACTCGGATGTCGTGGTGGCCGTGCCGCAAGGAAATTCCGCACCTTTGCAGACCTTTGCAGCGCCGGA CGCCGCTTTCTCGGGGGCGCCCGAGATGCCGCCGGCTCCGCAGACGCGCTGGGAGTCGCCAGCCCCGTCATCCTCCGCCAATCAGCCACCCAGCGCGCCC AGCGGCATACCCTCTGCCGGCGGATTGTCGGCCGATGAGCAACTCGATGGCCCGGTGCTGGCGCTGCTGACCACGGCCCAGCAGCAACAGGGTGGCGGTG
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| Amino Acid Sequence |
>penicillin-binding protein 1B
MTKARSPRTRSKRRSGPARPWLGWLLKLSIVALVLLAGMAIYLDAVVQEKFSGKRWTIPAKVYARPLELFVGQKLDKDDFLAELGALGYRRENAVSGPGG VSVAGSNVELHTRGFQFYEGAEESRRLRVRFSGDFVAGLSAVGGGELPVARLEPVTIGGLYPAHNEDRILIKLDQAPPYLIETLVAVEDREFFEHFGVSP KSIARAVWVNLTAGQVRQGGSTLTQQLVKNFYLTNERSLSRKATEAMMAVLLELHYDKQEILEAYLNEVFLGQDGRRAVHGFGLASQYFFGQPLAELKLH HVALLVGMVKGPTYYNPRRHPERALNRRNLIIDLLAEQQVITPEEAAAAKSKPLGITQRGSLADSSYPAFLDLVKRQLREDYREEDLTEEGLRVFTSFDP ILQLKAEAAMSETLKRLGGKATAEIEGAMVVTNPETGEIQAMLGSRQPGYAGFNRALDAVRPIGSLIKPAIYLTALERPSQYTLTSLLEDEPFSVKGADG QVWKPQNYGRNAHGTVYLYQALANSYNLSTARLGLDLGVPQVLKTLGRLGASPDWPAYPSMLLGAGGLRPIEVADMYQTLANGGFNTPLRGIRSVLTAGG EPLKRYPFQIQQRFDPGAIYLTQYAMQRAMREGTGRSAYNRVSQSLALAGKTGTTNDSRDSWFAGFSQDLLAVVWLGRDDNGKTSLTGATGALQVWSDFM RRADPLPLNMPVPDNVVHAWVDAETGLGTDERCPGAVQMPYIRGSEPGPGPGCGIQAPAESVMDWVRGWLQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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