Pseudomonas stutzeri DSM 10701, PSJM300_03985
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri DSM 10701 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CAAGCGGCCGCGACTGGAGAGCCGCTACCAGCACAGCGATCAGGGCTCAAGTTTCCGCAAGCTGATGGACGCGATTCGCCAGGTGCTGTCGATGGTGCTC GAGCAACATGCCATCGAGTTGCTGCTGCAGCAGCGCCAGTACGGCATTCAGGTCTCGCCGCTGCATGACCACAAACTGCTCGGCTCGGCATCCTTCGTGC TCGCGGCGAGCGCCCAGTGCGATTCGGAAGAGCTGCGTACGCGCCTGCCTGCCCACCTGAAAGTGGGCCCGGTGGAGCGCATTCGCCAACTGGTCAACCT GCATCTGCCGGGTATCAGGATCAAGCCGCTGCCGGTGGCACCGCGGCAGATCCCCTTCCATGCGGGCAAGACTTACTTCGCACTGGAACTCAGCCCCGAG GACCAAGCCCAGCTGGAGCGGTCCGGCGGCTTCGCCTTCCATGTGTCCGGCGACTTCACCGGGCTTGAACTGAAATTCTGGGCAGTCAGGGATTGACGAC
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| DNA Sequence for Gene |
>PSJM300_03985
ATGATCAGAGAAATGGACTACGGGCAGGATGACAAGACGGTAATCGTCAACCGCGGCGGCGAAGAGGCCTCGCAGAGCCCACTGACGGATTTTGCCGTGC CACCGAAATTCGAACAGCTGGAGGAGCGGATGATCTACGCCGCTCGCCTGCGCCCGGCGGAAGTCTTCAACATCAGTCTCAACCCGCTGGTGGCCGCGGC CTCGTCCCTGCTTTCGGAAGTGGTACGCCTCAAGCACAGCCCCGAGGGCGAGGATTTCCAGGCGCTGCACGCAAGATTGACCGGCGCGATCAAGCTGTTC GAACACCGGGCGTTGCACGATGGCTGTGAAAGCAGCCAGGTGATGGCAGCCCGTTATGTGCTCTGCACGGTGCTCGACGAGGCGGTGGTGACCACGCCCT GGGGCAACGAGAGCGAATGGTCGCAGATGAGCCTGCTGAGCAACTTCCACAACGAGACCTTTGGCGGGGAGAAGTTCTTCCAGCTGCTCGAGCGCCTGTC GCGCAATCCGGTCAAGCACCTGCCGATGCTGGAGCTGCTGTATCTGTGCCTGTCGCTCGGCTTCGAAGGCAAATACCGCGTGCTGCCGCGCGGCATGCTC GAGCTGGAAGCCGTACGTGACAGCCTGTACCGGCAGATTCGCCAAATGCGTGGCGATGTTCCCCGCGAGCTGTCGCCGCATTGGGAGGGGCTGAAAGACA CGCGGCGGCGCCTGGTGCGCATCGTACCGTGGTGGATGGTGGCGCTGTTCACCCTGGCCTGTCTCGGGGTGATGTATAGCGGTTTCGCCTGGGTGCTCAG CGAGCAGCGCTCGACCGTTCTGCAACCGTACCAGTCGCTGGATGCCGACTCGGTGGATTCACAGCTTTCGTCAGGGATGAATTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AATGAAGGTTTTCTTCGCCAAGCTCGGCGCCTTTTTTCGCAAGACCTGGGTCTGGAGCCTGTGTCTGGTGCTAATGGCCGCGCTGCTGGTCTGGTTTGCC GGCCCGCTGTTCGCGGTCGACGATCACAAGTTCTGGGAATCGGCCACCAGCCGCCTGTTGACCATCAGCACGCTGTTCCTGATCTGGGGGCTGGCCATGG TGTTCGCCAGCTGGCGTGCCACGATTCGCAGGAAAAAGGAAGAAGACGACCAGGACGTCCAGGAAAAGCTGCGACGCGATGGGGCGATCGGTGAAGAACA GCAAGAGCTGCGCCATCGTTTCAAGCAGGCGCTGCGTACGTTGCGCAGTTCCAGCCTGTATCGCGGGCGCAGTGAAAAATGGCGCAACGAGTTGCCCTGG TACCTGCTGCTCGGTCCTCAGGGGAGTGGCAAGACCAGTCTGCTGGATTTCTCCGGGCTGGATTTTCCGCTGAACCGTGGCGAGAACCAACGCCTGACCA
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| Amino Acid Sequence |
>outer membrane protein
MIREMDYGQDDKTVIVNRGGEEASQSPLTDFAVPPKFEQLEERMIYAARLRPAEVFNISLNPLVAAASSLLSEVVRLKHSPEGEDFQALHARLTGAIKLF EHRALHDGCESSQVMAARYVLCTVLDEAVVTTPWGNESEWSQMSLLSNFHNETFGGEKFFQLLERLSRNPVKHLPMLELLYLCLSLGFEGKYRVLPRGML ELEAVRDSLYRQIRQMRGDVPRELSPHWEGLKDTRRRLVRIVPWWMVALFTLACLGVMYSGFAWVLSEQRSTVLQPYQSLDADSVDSQLSSGMN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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