Pseudomonas stutzeri DSM 10701, PSJM300_00700
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri DSM 10701 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CTGATGATCACCAAGGTCTTCGACAAGTCCTCGCCGCTGATCTTCAACGCCCTGACTTCCGGCGAGCGGCTGAACAAGTGCCGCCTGGAGTGGTACCGCA CCTCCTCGACCGGAACCCAGGAGCACTACTACACCATCGAACTGGAAGACGCGGTGATCGTCGACGTGCAGTCGCGCATGCCCAACTGCCAGGACCCGAA CATGTCGCATTTCACCCACCTGGAAGACGTGTACTTCACCTACCGCAAGATCGTCTGGACCCACGAAGTCTCCGGTACCTCCGGCTCCGACGACTGGCGT ACCCCGATCGCCGGCTGAGTGATCAGTGATTTCGGCCGGGCCCGCCTGGCCGAAGTCTTTTTTGCGAAGCAGTCTCCAGAAACGGGTTACGCCGCTCTGG AATGCGCGCTACCCGCATTCCAGAGCGGCGTCTCTGTGGTACATCGACACCCCTCACCGCGCCAAGCGCCGATCAATGGATTGATCCAAGAGGAACATGC
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| DNA Sequence for Gene |
>PSJM300_00700
ATGTTCGCCCCCGCCAACCAGGCCCATTTCACGCTGACCATCGAAGGTCTCGAGCATGACCTGAAGGTGCTCGGATTCAGCGGCCGCGAGGCCATCAGCC AACCCTACCGATTCGATCTCGAGCTGGTCAGCGAACACCCCGACCTGGACCTCGAAACCCTGTTGCACCAGCCGGCCTTCCTCACACTCGGACACGAGGG CAGTGGGATCCATGGGGTGATCCATCGCATCGCCCAAGGCGAATCCGGTCAACGCCTGACACGCTACAGCCTGTCGCTGGTGCCCCAGCTGGCCTACCTG GCGCATCGGCTGAACCAGCGCATCTTCCAGCAGCTCAGCGTGCCGCACATCGTCGCCCAGATACTGGAAGAGCATGGCATTCAGGCTGGGCTGGGACACC GGTTCGAGTTGGGGCCGGTGATCTACCCCGAACGCGACTACTGCGTGCAGTACGACGAGAGCGACCTGCACTTCATCCAGCGGCTGTGCGAGGAGGAAGG CATCCACTATCACTTCCAACACAGCGAAGCCGGCCATGTGCTGGTATTCGGTGACGACCAGACGGTCTTTCCGAAACTTGCCCCCGCGCCTTACCAGCAG GACTCCGGTCTGGTCGCCGACGAGCCGGTGATCAAGCGCTTCGGCCTGCGGGTGGAGACCCGCCCCAGCCGCGTCACGCGCCGCGACTATGATTTCGAGA AACCGCGCCTGCTGCTGGAAAGCGCCTTTACCAGTGAGTTCGCTCCGGACCTCGAAGACTACGACTACCCCGGCCGCTTCACCGACCGCGGCCGTGGCAA ACACCTGGCGCAACGCGCCCTGGAACGCCACCGTCACGACTTCCAGCTGGCCGACGGCGAAAGCGACCAGCCAAGGCTGTGCAGCGGTCATTTCCTCGAG CTGGTGGAGCACCCACGCAGCGACTGGAATCAGCTCTGGCTGCTCACCGAAGTGTTCCACCAAGGCAAGCAGCCACAGGTGTTGGAGGAATCCGTCACTG ATTTTTCAGGCAGCTCTGCGCCGGCTCCCTCCCCTCTGTGGGGAGAGGGCTGGGGCGCCCGGCATAGTGGTGAGGGGGCTGACGGTTTCACCCAAGGCTA CCGCAACCAATTCACCGCCACGCCCTGGAGCGATCCCTTCCGTCCACCCCTCCAGCATCCCAAGCCACGCATCCTCGGCAGCCAGACCGCTGTGGTCACC GGCCCTGCCGGCGAGGAAATCCACTGCGATAAACATGGTCGCGTGAAGGTCCAGTTTCACTGGGACCGTGAAGGCCTGGCGGACGACAAGTCCAGCTGCT GGCTGCGCGTCAGCTCAAGCTGGGCCGGCGACCGCTACGGCGGCATCGCCATCCCGCGGATCGGCATGGAGGTACTGGTCACCTTCCTCGAAGGCGACCC CGACCAACCGCTGGTGACCGGCTGCCTGTACCACGCCGAGCATGTTCCACACTACGAACTGCCGGCGAATAAGACGAAATCGGTCTTCAAGACCCTTAGC TCACCCGGTGGCGATGGTTATAACGAACTGCGCATCGAGGACCGCAAGGGCGCCGAGCAGATCTACGTGCATGCCCAGCGCGATTGGGACCAGAACATCG AGCACGATCAGAAGATCCGCGTCGGCTTTGAGCGCCACGATACGGTGGAAGCCAATGCCTACAGCGAATTCCAGGCCGAGGAACACCGCACCACCCACGG CGACCGCAAGACCGAAATCGGAGCCAGCGACCACCTCACCATAGGCGATAGCCAGCACGTCAAGATCGGCACTGGTCAGTTCGTCGAAGCCGGCAACGAA ATCCACCTCTCCAGCGGCCTCAAGGTCGTCCTCGAAGCCGGCAGCGAACTGACCTTCAAGGCAGGTGGCAGCTTCGTGAAGCTCGACGCCAGCGGCGTGA CCATGCTGGGGCCGGTGATCAAGGTGAATTCGGGAGGGAGCCCGGGCAAGGGATCGGGAGCGGCTCCGATTTTTCCGGTTTTACCCAAACTTGCAGATAC AGCGCCAATAGGTGAGAAAACCGGTATTGCCAACCTAAACCTGCCGTCCTCACCAATAAAAAAAGGCGCTAAGGGGCCTGAGCAATTGATCGTCGACGTC TGGGGCGACCCGGCACAAGGCGGGCAAGTCAAATTGCTCGACCCGGAGGACGAGGCATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCGAGTTGAAGGATCAACCCATCGAGCAAGGCGTACGCAAACGTACCCAATACGAGAATACGCAACGAAAGAGGCTTGCACTGAGCATTGAACGGGAAGA CGGCGGAGAACTTTCTCTGCCCATCGCCGTGGACATGCGCAGCCATGAAGAAGAAGAAAATATTCAGCAGAACACGCTCTTGGCCATCATGCCGTTGGCG AGGCTGCCAGGTCATAACGTCTATAACGAGGCACCCAGGGGAGCGCTGCCACGCGCGGGTCGTATATACGTATTTCAGGGCGGAAAGCTCTGGCGCGAAG TGCTATGCGACGGTCAAGGCAACATGAAGGACGTCGATCTTGCTCGTTGGCGTAGACAGGCCGAGAGCGGAGCACCTGCCGATGATCGTCAACCCGTAGG CAAACAGCAGCAGGTTCTGCTGTTCCCCATCCTGGTACAGGGGCAATCCGTCGCTAACAACTATCTGATGGCCTACAGCGAAAAGCCCTGGACGTGGGAA
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| Amino Acid Sequence |
>Rhs element Vgr protein
MFAPANQAHFTLTIEGLEHDLKVLGFSGREAISQPYRFDLELVSEHPDLDLETLLHQPAFLTLGHEGSGIHGVIHRIAQGESGQRLTRYSLSLVPQLAYL AHRLNQRIFQQLSVPHIVAQILEEHGIQAGLGHRFELGPVIYPERDYCVQYDESDLHFIQRLCEEEGIHYHFQHSEAGHVLVFGDDQTVFPKLAPAPYQQ DSGLVADEPVIKRFGLRVETRPSRVTRRDYDFEKPRLLLESAFTSEFAPDLEDYDYPGRFTDRGRGKHLAQRALERHRHDFQLADGESDQPRLCSGHFLE LVEHPRSDWNQLWLLTEVFHQGKQPQVLEESVTDFSGSSAPAPSPLWGEGWGARHSGEGADGFTQGYRNQFTATPWSDPFRPPLQHPKPRILGSQTAVVT GPAGEEIHCDKHGRVKVQFHWDREGLADDKSSCWLRVSSSWAGDRYGGIAIPRIGMEVLVTFLEGDPDQPLVTGCLYHAEHVPHYELPANKTKSVFKTLS SPGGDGYNELRIEDRKGAEQIYVHAQRDWDQNIEHDQKIRVGFERHDTVEANAYSEFQAEEHRTTHGDRKTEIGASDHLTIGDSQHVKIGTGQFVEAGNE IHLSSGLKVVLEAGSELTFKAGGSFVKLDASGVTMLGPVIKVNSGGSPGKGSGAAPIFPVLPKLADTAPIGEKTGIANLNLPSSPIKKGAKGPEQLIVDV WGDPAQGGQVKLLDPEDEA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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