Pseudomonas stutzeri CCUG 29243, A458_21610
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri CCUG 29243 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CTGCCGAACCATCCTCATGACTGCAGCTCGTGCTAACAACTGCCCATGATGATTGCAATGGAAACAAGGCTAGCAACATCAGCAAAACTATTTTTCTCAT CCAAGACAAAACGATGACTTCCTGGTTTAGATGTCGAATCCAATCATAAGAACTACCCCCGCCAAGACGCGAAACACATGCGCCTCTACTGCGATAGTGA TTCGCCCTGAATTTAGTAGACAAATACACGAAAGCGTTTTTATCAGCCTTGCCAAGCCGGCGAGATAGCTGATGGCTATGGGGTGGTGACTTTAAATAAG TGTGGATAACGACCTGGTGACCGCAACATTACAAATCTGTAATCGAAGGAGTGCGCGATTGGGCTTCCTCAGATTACAAAATAGTCATTTGCCGCTAATC CTGCCGTCATCTCTAGGGGAAGAACATGGCCAAGCGCTAAAAACAAAAAGGCGAAAGGCGTCATTCGAGCACTGACCTGCCGTACATAAGGAGCATCATC
|
|
| DNA Sequence for Gene |
>A458_21610
ATGAGCAAAAAGGCCGTTTTTTCGCTGACAGCCCTTTCACTGGCATTGGGCAGCGCCCCGGTCTTTGCCCAATCGGAAACAGCCGAGGGCTTCATCGAAG GCAGCACGCTATCGCTGATAAATCGCAACTTCTATTTCAATCGGGATTTTCGCGACGGTGAGAGTGCCGCCGGCAATGGCTACTCCGAGGAATGGGCCCA CGGATTGATGGCCTTCTTCGAGTCCGGATATACCCAAGGCTCGGTAGGGATTGGCTTCGACGCTTTCGCCATGCTCGGCCTCAAGCTCGACTCCGGTTCG GGGCGCTCCGGTGTGGGCGGCAGCATCGACCTGCTTCCCCACGACAGCGCTGGCGATCCTGAGGATGACTTCACACGGGTGGGGGGCGCGGTGAAAGCAC GCTTGCTGGACACCGAGATCAAGGCCGGCGATGTATTTCCCACTACACCTGTCGTGCACTTCGGCGACTCTCGGCTGCTGCCGGAGTCTTTCAAGGGTGT CACCGTTGTGAACAACTCGCTGGACGACCTCACCCTTCAGGGAGGCCGCTTGCACGCGATGAGCCAGCCCAACACCAGTAACATGAACGAAGACTTCGTC ACCTTCTACGGCGGGGGCGTAGACGCGCCTTGGCTCGGCTACGCAGGCGGTGACTACAGCGTGAATGAAAATATCAGTCTTAGCCTGTACACCAGCCGCC TCAAAGATGCCTGGAACCAGCATTACTTCGGTGCGTCGGCCACCTATCCGCTCTCCGATATCGTCGCGCTGCTGGCCAGCTTCAACTATTACAAGGCAAC CGACGAAGGCCGTGAGTTGCTGGGCGAGTTCAACAACAACATCTGGAGCTCCAGCCTGGGTGTCGCCTTCGGCGCGCACACCGTCACGGCGTCGTATCAG CGAAACAACGGTAACAACGACTTTGACTACTTGCGCCAGGCGGACTCGATCTACCTGAACAACTCCATTCAGTACAGTGATTTCAACTCACCTAAAGAGC AGTCCTGGATGCTGCGCTACGACCTGAACATGGCGGAGTACGGCATACCCGGGCTTACTTTCATGACCCGCTACGCCCGCGGTTGGGGCGCCGATTACAG CAACGCGAACGAGGTGTACATGCGCCAAGACGATAACGGTGCGCCGCTGACGGGACAGAACCGCTGGGAACGCGACGTCGAAGCCCGCTACGTTGTACAG ACTGGCTCTCTCAAGGATTTGTCTCTGCGGGTGCGCCAGGCTACCACGCGGGCGACTGCTTTCGAGTCCGACCTCGATGAGGTCCGATTCATCGCCGAGT ACCCTCTCTCGATCTTGTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
AACACCATGAGCAACACCACATCTTCTTTAGTTTTGCTCCCTTGGTTTGAAGATGTGTTTCAGGCGCCCATCAGGGCGCCTTTTTTCGTTTGGTGCACCC GCTCGCGCTGCGGGTCAACCAAATGACCGGTAGATTACAAATTCGCAAGATAGCCCTCACAGGGCTTTTACCGCGTTAAAGTGCTTCCCGCTTCCCTGGG CAGATCTTTTCGCCTCTGCCTTTCACGCTAGAGCCAAGCCGCTTTCGTCTTGACCTAGTTACTACATGGATTTTTTTGGTTCCGCTTACCGCGCACCTCC TTGCCGAGTTACCTCAAAACATGCGCATCCTGGTTGTCGAAGACGAGATCAAAGCTGCGGAATACTTGCAGCAGGGTCTTATCGAATGTGGTTACTTGGT CGATTGCGTAAGTGATGGCCTCGATGGGTTTCACCTGGCACTGCAGAACGACTATGACATCGTGCTGCTAGATGTGAATCTGCCAACCATGGATGGGTGG
|
|
| Amino Acid Sequence |
>outer membrane porin
MSKKAVFSLTALSLALGSAPVFAQSETAEGFIEGSTLSLINRNFYFNRDFRDGESAAGNGYSEEWAHGLMAFFESGYTQGSVGIGFDAFAMLGLKLDSGS GRSGVGGSIDLLPHDSAGDPEDDFTRVGGAVKARLLDTEIKAGDVFPTTPVVHFGDSRLLPESFKGVTVVNNSLDDLTLQGGRLHAMSQPNTSNMNEDFV TFYGGGVDAPWLGYAGGDYSVNENISLSLYTSRLKDAWNQHYFGASATYPLSDIVALLASFNYYKATDEGRELLGEFNNNIWSSSLGVAFGAHTVTASYQ RNNGNNDFDYLRQADSIYLNNSIQYSDFNSPKEQSWMLRYDLNMAEYGIPGLTFMTRYARGWGADYSNANEVYMRQDDNGAPLTGQNRWERDVEARYVVQ TGSLKDLSLRVRQATTRATAFESDLDEVRFIAEYPLSIL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|