Pseudomonas stutzeri CCUG 29243, A458_18610
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri CCUG 29243 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GCGCATGGAGAGCTGACCGTCGCCGTGGTGGATATCGGTGCCACCATGACTACCCTCAGTGTTCTGCATAACGGTCGTACTATTTATACCCGTGAACAGC TTTTTGGTGGGCGTCAGCTGACGGAGGAAATTCAGCGACGCTACGGCCTTTCACAAGAAGAAGCTGGTCTAGCCAAAAAGCAAGGCGGCCTCCCAGACGA CTACGACAGTGAGGTTTTGCTTCCGTTCAAAGAGGCAGTTGTGCAGCAGGTTTCTCGCTCGTTGCAGTTCTTCTTTGCGGCAGGACAGTTCCATGATGTC GACTGCATCCTGTTAGCGGGCGGGACGGCATCGATATCTGGGTTGGATCACATGATTCAGCAGAAGATCGGTACTCAGACTCTAGTTGCGAATCCATTCG CCGATATGGCTTTGAGCAGCAAAGTGAATGCTGGAGCGCTGGCTAGCGATGCGCCGGCCTTGATGATTGCTTGTGGCCTGGCGCTGAGGAGCTTCGACTA
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| DNA Sequence for Gene |
>A458_18610
ATGGCGCAAATCAACTTACTTCCGTGGCGTGAACAGCTGCGTGAAGAACGAAAGCAGCGTTTCCTAGCGTCTCTCGTCGGTGTGCTGGTCATAGCGGCTG GTCTGGTCTTTCTTGGAGATCGTTATTTCCAAGCTGCGATTGAGCAGCAGAGTGCGCGCAACGAGTTTGTCAAAAAGGAAATTGCGGTTCTTGATGCTCG TATTAAAGAAATCAAGGAATTGAAAGAGCGTCGTCAGCAACTACTGGAGCGAATGAAAATCATCCAGGACTTGCAAGGTAATCGACCTATTATTGGGCGA GTTTTTGATCAGCTTGTAAGGACTCTTCCGGATGGAGTGTATTTCACTTCGGTAAAAATGACCGGAAAGAATATTGCGATCATTGGTGCCGCCGAATCGA ACAATCGTGTCTCCAACCTTATGCGCAATCTTGATGCCTCTGATTGGCTCGAAGCGCCGAATCTGAACGAGGTGAAAGCCGTCACCGCCGGTGCCGTGGA TCAGGAAAATGTGTTCCAGCTGACGGTTCAGCAAACGCAGCCGGTTGCCGCTACGGAAGGAGCAAAGCCATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GTCTGGCTGAATCGTTAGATAGTTTTCGCAAGATAGACTTCGCTGATCTCGATCTTAATAACCTCGGTTCTTGGCCTGCGCCGGTCAAGTTCATTGCCGG CGTTATGCTTCTCGCAGCGGTGCTTGCTCTAGGTTATTACTTTCATTTGCAGGATATGCAACTGCAATTGGAGCAGCAGCGCGCTCAGGAAGAAACCTTG AAGCAGCAGTTCTCGACCAAAGCCTTCCAGGCCGCCAATTTGGAAGCTTATAAAGCGCAAATGGCCGAGATGGAAACGTCGTTTGGTGCGTTATTGCGGC AACTGCCAAGCGATACCGAGGTCCCTGGGCTTCTGGAAGATATCACTCGAACAGGTCTCGGTAGTGGGCTGGAGTTCGAGGAAATCAAGTTGCAGCCAGA GGTGGCTCAGCAGTTTTATATCGAGTTGCCTATAAATATTAAGGTCGTTGGGGGGTATCACGATCTGGCAACTTTCGTGAGTGGTGTGGCAAGCCTTCCG
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| Amino Acid Sequence |
>type 4 fimbrial biogenesis protein PilN
MAQINLLPWREQLREERKQRFLASLVGVLVIAAGLVFLGDRYFQAAIEQQSARNEFVKKEIAVLDARIKEIKELKERRQQLLERMKIIQDLQGNRPIIGR VFDQLVRTLPDGVYFTSVKMTGKNIAIIGAAESNNRVSNLMRNLDASDWLEAPNLNEVKAVTAGAVDQENVFQLTVQQTQPVAATEGAKP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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