Pseudomonas stutzeri CCUG 29243, A458_15950 (sbcB)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri CCUG 29243 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
TGGTTCAGTACTTCGAAGAGCACCATGTACCACCATTGCACGAGGAACAGCAGTAGCGTCCCAAGACCGATACCAAAATTGCCCAGCATCCCCAGGATGA TGAAGAGGGCCACCAGGATGGCGGCACGGATCGCCAGGTCGATGGCAAAGGCCAGCGCGCGCGGCACGAGCCCGGCCGGACGCAGGAGTAGATCGATGCC TTCGGGCGTCTCCACGCGATGGCTATTGTCGAGCAGCGATGGTCGGTCGAGAGCTGAATGCAAGGGTAAAGTCGTCTGAGGCAGGCAAAGGTCGATGCTA TGCGGCAAGTGCCGCTGCGGCAATGCGCCTGAGTCGTCTGAGCGGAGGGCAAGCCGGAGGGGGGTGATTATGGCGAAGTGCCTGCTCCTTTGCAGGATGT CGTTCGCATACCCAATGCTGAGCGGGCAGATCGGTTGACGCACGCGGCGATGTGCCGCCCTGGCTGATAGACTGCCGCGCTGATCGAGAAGGACTCTCCC
|
|
| DNA Sequence for Gene |
>A458_15950
|sbcB
GTGAATTCAAGCATCTTCTGGTACGACTTCGAAACCACAGGGATCTCGCCCAGCCGCGACCGCCCGTTGCAGGTGGCGGGTATCCGCACCAACGAGGCGC TCGAGGAAATCGGCGAGCCGCTGAACATCTATTGCCGTCCCTCCGACGACATCCTTCCGCATCCGGCGGCCTGCCTGGTCACCGGGATCACCCCCGCGAC CCTCGAACAGAAGGGCTTGTGCGAGGCCGAATTCATTCATCGTCTGCATCAACAGCTGTCGTTGCCTGGCACCTGCGGCGCCGGTTACAACAGCCTGCGG TTCGACGACGAGGTGACGCGCTATAGCCTGTACCGCAACTTCTACGATCCCTATGCCCGTGAATGGCAGGGCGGCAACAGCCGCTGGGATCTGATCGATC TGGTACGCACGGCTTATGCCCTGCGCCCGGAAGGCCTGGTCTGGCCTGAAGAGGAGGGGCGGGTGACGCTCAAACTCGAACGACTGAGCGTGGCCAACGG GCTGGAACATCTGAATGCGCACGACGCGCTATCCGATGTGCGCGCGACCATTGCCTTGGCCAGACTCGTTCGCGATCGGCAGCCGCGGCTGTACGACTAT CTCTACAACCTGCGCCGCAAGCAGGCGGTGCTTGAGCAGATCCGGTTGCTGGAACCCATGGTGCACGTGTCCGGCCGCTTCTCCGCTGCACGGCATTTTC TCTCGGTGGTCCTGCCGCTGGGCTGGCACCCGCGCAATCGCAACGCGCTGATCGTCTGCGATCTGCAGGCCGGACCGGAGCCGCTCTTGCAGGAAACGGC TGAAACGCTGCGTCAGCGCCTGTATACCCGACGTGACCAGCTCGCCGATGGCGGGTTGCCGGTGCCCTTGAAGCTGGTGCACGTCAACAAGTGTCCCGTG GTGGCGCCGCTCAAGGTTTTGCGCACGCAAGACATCCAGCGCCTTGGTCTGGATATGCCGATCTGCCATGAGCGTGCAGCGATGCTTCGAGGGCAGCGGC AGATCTGGAGCACCAAGCTCGAAGACATCTATCGCGAAGACCGCTTCGCTGGCACTGATGATCCGGAGCAGCAGCTGTATGACGGTTTTCTCGGGGACCG CGACCGGCGGCTGTGCGACCAGGTCCGTAGCCTGTCACCTGCGGAGCTGGCGAAACAGCCATTCCGATTCGATGATGCGCGCCTCGACGAGCTGTTGTTT CGTTACCGCGCGCGTAACTTTCCTGAAGCGTTATCCGTCGACGAGCAAGCGCAATGGCGTCAGTTCTGCCAACAGCGGCTGAGTGATGGGGCATGTGGCG CGCCCAACACCCTCGTGCAGTTCGAGTCGGATATCGAGCAATTCATGATCGGCGCCACGCCGGCACAACGGCAACTGTTGCAGCAATGGCGCGAGTACGG TCAGGGGTTGCGTGAGCGTTACCGCTTGAGCAATTAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
CTCTTGGGGAGGGCGTATGTTTGTGCGCCACGCCTGAATCGAGCGGGGAAGGAAGAGTGCAGCACAAATAAAAACGCCGTTTCCCGACATCAATGATTAA TGTCGAGAAACGGCGTTCGTTATAAACCGTAGCCGCTTAGCCGAGAAGGGTGGCCCAGCTTTCCACGGTGTCGGAGCCCCACTGGGCTTTCCATTCTTTC AGGGTCTTGTGATTGCCGCCTTTGGTTTCAATCACTTCACCGCTGTGTGGGTTTTTATATTGCTTCACGCGGCGGGCGCGCTTGCTGGTCGCGGGAGCTT TTGCAGCGCGAGGGCTCTTGCTGTTGCGAGAGGCTTCCGGATCGAGCAGGGCAATGATGTCGCGCAGGGACTTCTGGTATTCACCCATGAGTTCGCGCAG CTTGCCTTCGAATTCCAGTTCCTTTTTCAGCTTGTCGTCTTCGGACAGCGACTTCAGGCGCTCTTGAAGTTCCTTGATGGCTTCTTCAGTAGCGCGATAC
|
|
| Amino Acid Sequence |
>exonuclease I
MNSSIFWYDFETTGISPSRDRPLQVAGIRTNEALEEIGEPLNIYCRPSDDILPHPAACLVTGITPATLEQKGLCEAEFIHRLHQQLSLPGTCGAGYNSLR FDDEVTRYSLYRNFYDPYAREWQGGNSRWDLIDLVRTAYALRPEGLVWPEEEGRVTLKLERLSVANGLEHLNAHDALSDVRATIALARLVRDRQPRLYDY LYNLRRKQAVLEQIRLLEPMVHVSGRFSAARHFLSVVLPLGWHPRNRNALIVCDLQAGPEPLLQETAETLRQRLYTRRDQLADGGLPVPLKLVHVNKCPV VAPLKVLRTQDIQRLGLDMPICHERAAMLRGQRQIWSTKLEDIYREDRFAGTDDPEQQLYDGFLGDRDRRLCDQVRSLSPAELAKQPFRFDDARLDELLF RYRARNFPEALSVDEQAQWRQFCQQRLSDGACGAPNTLVQFESDIEQFMIGATPAQRQLLQQWREYGQGLRERYRLSN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|