Pseudomonas stutzeri CCUG 29243, A458_15715

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003887 DNA-directed DNA polymerase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_01113
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006281 DNA repair
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF100879
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003684 damaged DNA binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF100879
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
FunFam G3DSA:3.40.1170.60:FF:000001 DNA polymerase IV - - 26 78 3.4E-23
SUPERFAMILY SSF56672 DNA/RNA polymerases IPR043502 DNA/RNA polymerase superfamily 3 239 1.33E-91
Gene3D G3DSA:3.30.1490.100 - IPR036775 DNA polymerase, Y-family, little finger domain superfamily 246 353 7.9E-22
Gene3D G3DSA:3.30.70.270 - IPR043128 Reverse transcriptase/Diguanylate cyclase domain 9 171 4.9E-64
Pfam PF11799 impB/mucB/samB family C-terminal domain IPR017961 DNA polymerase, Y-family, little finger domain 245 352 1.9E-7
FunFam G3DSA:1.10.150.20:FF:000019 DNA polymerase IV - - 172 233 1.6E-20
SUPERFAMILY SSF100879 Lesion bypass DNA polymerase (Y-family), little finger domain IPR036775 DNA polymerase, Y-family, little finger domain superfamily 247 353 2.16E-21
FunFam G3DSA:3.30.70.270:FF:000002 DNA polymerase IV - - 74 170 2.3E-39
PANTHER PTHR11076 DNA REPAIR POLYMERASE UMUC / TRANSFERASE FAMILY MEMBER - - 6 341 3.7E-97
Pfam PF00817 impB/mucB/samB family IPR001126 UmuC domain 12 159 1.5E-51
Hamap MF_01113 DNA polymerase IV [dinB]. IPR022880 DNA polymerase IV 6 353 36.448395
Gene3D G3DSA:1.10.150.20 - - - 181 234 1.4E-17
Gene3D G3DSA:3.40.1170.60 - - - 26 78 4.9E-64
CDD cd03586 PolY_Pol_IV_kappa IPR022880 DNA polymerase IV 10 339 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.