Pseudomonas stutzeri CCUG 29243, A458_14365
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri CCUG 29243 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GGATTCTGCGTCGCCATCGCCACCATCACCCGATGCAGACCGATGGACTCGGGGCTATTGACCAGTTCATTGAAGGCGCCGCCGATCGCCAGCAGCACCT TCTCGATGTCGCAATCCGCCTCCACCTGAAACAGCCGCCTCGGCAGGCGCGTTTCGCAGGTGGTCTTCACGGCCGCGCTGAAGAGCGCCTCCTTGTCCTT GAAGTGGCTGTACAGCGTGAGCTTGGAAACGCCAGCTTCGGCGGCGATGGCCTCCATGCTGCTGCCTTCGTAGCCGTTGCCGAGGAACAGCACCTGCGCG GCAGCGAGGATCGCCTCGCGCTTGGCGGGGTCCTTCGGGCGGCCTGGGCCGGGCGATACGGAATGGATTTCTGTCATGGGCGTTTTAATAGTGGACTGGC TGGTACGCTATTTTTACTATACCGCTCAGTATAAGTATTCCAATCCGCTTCGCGACAGAGAGACTTCATCGTGTTCCGACATGCCTTGTCCCTTGCCTCT
|
|
| DNA Sequence for Gene |
>A458_14365
ATGTTCGGTTGTGCACTTGTTCTGGTCGCCTGCGGCAACGGCGAGCCGCCGCAGCAGCTGCCTCGTCCGGTCATGGTGGTGCAGCCGCAGCCGGCCAGCG AAGCACGCGAGAGCTATCCCGGCGAAGTGCACGCGCGCTACGAGCCTGAGCTGGCCTTTCGCATCGGCGGCAAGGTCGTCGAGCGGCTGGTCGAAGCGGG CGACCGTGTACGCAAGGACCAGCCCTTGGCTCGTCTCGATCCGCAGGATGTGCGGCTGCAGCTGGACGGCATGCGCGCGCAGGTGGCGGCCGCGGAAGCC AATCTGCGCGTGGCCAAGGCCGAACATGACCGCTACAAGGCGCTGCTCGGTCGCCAGCTTGTCAGCCAGTCGCAGTTCGATAACGCCGACAACTCCTATC GCGCCGCGGCTGCCCGCTTGCAGCAGGCGCGCGCCGAATTCGATGTGGCGAGCAATCAGGTCGATTACGCGGTACTGCGCGCCACCAGCGATGGCTTGAT CGCGCAGCGCCGAGTCGAGGTGGGGCAGGTGGTCGCTGCGGGGCAGACCGCGTTCGTACTGGCAGCGGATGGCGAGCGGGAAGTGGCCATCGATCTGCCG GAGCAATCGCTGGAGCGCTACCGGGTTGGCCAGGAAGTCGAGGTCGAACTCTGGTCGCAACCGGGGCGCCACTATCTCGGCAAGATCCGCGAACTCTCGC CAGCCGCCGATGCGCAGTCGCGGACCTATTCCGCGCGCGTTGCCTTCAGCGAACAGGAGGTGCCAGCCGAGCTGGGACAGAGCGCGCTGGTGAGCATTCG CCGCGATGGCGAAGTGTCGCTGGCGGTGCCGCTGTCAGCGCTGAGTGCGGAAAAGGGCCGGGCGCATGTCTGGCGGCTCAGAGCCGATTCCACCGTCGAG CGGGTCGAGGTTCGGACCGGGCCCTTCGGCGAACAGCTGGTGCCAGTCCTCGAAGGGCTCGACGCCGACGACTGGATCGTCCTGGCCGGGGTGCAGATGC TCAGCGATAACCAGCCGGTTCGCCCGGTGGATCGCCACAATCGCCCCGTCGAGCTGGCCGCCCAGGAGTAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TCGCGATGCGCTTCAATCTCTCCGCCTGGGCGCTGCAGAACCGGCAGATCGTCGTCTACCTGATGCTGCTGCTGGCGATCGTCGGCGCGCTGTCCTACAG CAAGCTAGGCCAGAGCGAGGATCCGCCATTCACCTTCAAGGCGATGGTCATCCAGACCCAGTGGCCGGGCGCTACCGCTGAAGAGATGTCGCGCCAGGTC ACCGAGCGCATCGAGAAGAAGCTGATGGAAACCGGCGAGTACGAGCGCATCGTCTCGTTCTCCCGACCGGGCGAATCCAATGTCACCTTCATGGCACGCG ACTCGATGCGCTCGAAGGACATACCCGACCTCTGGTACCAGATTCGCAAGAAGATCGGCGACATCCAGCACACCTTTCCGCCGGGTGTACAGGGGCCCTT CTTCAATGACGAGTTCGGCACCACCTTCGGCAACATCTACGCCCTGACCGGCGACGGTTTCGACTACGCGATCCTCAAGGACTACGCCGACCGCATCCAG
|
|
| Amino Acid Sequence |
>RND efflux membrane fusion protein
MFGCALVLVACGNGEPPQQLPRPVMVVQPQPASEARESYPGEVHARYEPELAFRIGGKVVERLVEAGDRVRKDQPLARLDPQDVRLQLDGMRAQVAAAEA NLRVAKAEHDRYKALLGRQLVSQSQFDNADNSYRAAAARLQQARAEFDVASNQVDYAVLRATSDGLIAQRRVEVGQVVAAGQTAFVLAADGEREVAIDLP EQSLERYRVGQEVEVELWSQPGRHYLGKIRELSPAADAQSRTYSARVAFSEQEVPAELGQSALVSIRRDGEVSLAVPLSALSAEKGRAHVWRLRADSTVE RVEVRTGPFGEQLVPVLEGLDADDWIVLAGVQMLSDNQPVRPVDRHNRPVELAAQE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|