Pseudomonas stutzeri CCUG 29243, A458_09930
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri CCUG 29243 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CGTGTTCGACAACCGTGACGGCAGCTTCACCCCCGGCCTGTATGCACGCCTGAAGCTGGTCGGCAGCGCGACCTACGACGCCGTGCTGATCAAGGACGTC GCCGTTGGTACGGATCTGGGCAAGAAGTTCGTCCTGGTACTGGCCGAAGACGGCACTGTCGCCTACCGCCCGGTCGAGCTCGGTCCCAAGCTGGAAGGGC TGCGCATCGTCCGCAGCGGCCTGGCCAAGGGCGAAAGCATCGTGGGCAACGGTCTGCAGCGTGTGCGCCCGGGCAGCCCGGTGCAGCCGGAATCAGTGCC GATGGCCGACGCCGAAACGCTGGCCACCCTGCGCCAACAGAACCGTGCGATCAGCGAGGCGATGAAACCGCAGGTCGTCGAGCGCAGCCTGGCTCAGCGT CCTAGCAGCTGAGCTTCTCCCCCAACTGACCTGAACTCCGGCGCGCCAATCCGATCGATCCGCCAGGGCGCCAGACGCGCGCCCTACCCCGGAGTGCGCC
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| DNA Sequence for Gene |
>A458_09930
ATGAATTTCTCGCAATTCTTCATCAAGCGGCCGATTTTCGCCGCCGTGCTGTCGCTGGTGATCCTCATCGGCGGGGCCATCTCGCTGTTCCAGCTGCCGA TCAGCGAATACCCCGAAGTCGTCCCGCCCACCGTGGTGGTACGCGCCAACTTCCCCGGCGCCAACCCCAAGGTGATTGGCGAAACCGTCGCATCCCCGCT GGAGCAGGCCATCACCGGCGTCGAGGGCATGCTCTACATGTCGTCCCAGGCGACCGCCGACGGCAAGCTGACGCTGACTATCACCTTCGGCCTGGGCACT GACCTGGACAACGCCCAGGTGCAGGTGCAGAACCGCGTCACGCGCACCATGCCGACCTTGCCGACCGAAGTGCAACGCCTCGGCGTGACCGTCGACAAGG CCTCCCCCGACCTGACCATGGTGGTGCACCTGACCTCGCCGGATCAGCGCTACGACATGCTCTACCTGTCCAACTACGCCGCACTCAACGTCAAGGACGA GCTGGCGCGGCTGGACGGCATCGGCGATGTGCAGCTGTTCGGCATGGGCGATTACTCCCTGCGCGTCTGGCTCGACCCGGAGAAGGTCGCCTCGCGCAAC CTCACCGCATCGGACGTAGTCAACGCGATTCGCGAGCAGAACCGCCAGGTCGCTGCAGGTTCTCTGGGCGCACCGCCGGCACCGGGCGCGACGGACTTCC AACTGTCGATCAACACCCAGGGCCGCCTGGTTACCGAGGAGGAATTCGAGAACATCATCATCCGCGCCGGCGAAGACGGCTCGATCACCCGCCTGCGGGA CATCGCCCGTGTCGAACTGGGCTCCAGCCAGTACGCGCTGCGTTCGCTGCTGAACAACCAGCCCGCCGTCGCCATTCCGGTATTCCAGCGCCCGGGTTCG AACGCCATCGAAATCTCCGATTCGGTACGGGCACGCATGGCAGAGCTGAAACGCGACTTCCCGGAAGGCGTGGACTACGAGATCGTCTACGACCCGACCA TCTTCGTGCGCGGCTCCATCGAGGCGGTGGTACACACCCTGCTCGAGGCCATCGTGCTGGTGGTGCTGGTGGTGATCCTGTTCCTGCAGACCTGGCGCGC CTCGATCATTCCGTTGGCCGCCGTGCCGGTGTCGCTGATCGGCACCTTCGCGGTCATGCACCTGCTCGGCTTCTCGCTCAACGCGCTGTCGCTGTTCGGC CTGGTGTTGGCCATCGGCATCGTGGTGGACGACGCCATCGTCGTGGTGGAAAACGTCGAGCGCAACATCGGCCTCGGCAAGTCGCCTGAGGAAGCGACCC GTCAGGCCATGAAGGAAGTGACCGGGCCGATCATCGCCACGGCGCTGGTCCTCTGCGCGGTGTTCATCCCGACGGCGTTCATTTCCGGCCTCACCGGGCA GTTCTACCAGCAGTTCGCGCTGACCATCGCCATTTCCACGGTGATCTCGGCCTTCAACTCGCTGACACTGTCGCCGGCACTGGCCGCCGCACTCCTCAGG TCGCACGACGCACCAAAGGACGGCTTCTCGCGTCTGCTCGATCGAATTTTTGGTGGCTGGCTGTTCGCGCCGTTCAACCGCATGTTCGACCGCGCCAGCC ACGGCTACGTCGGCCTGGTGCGGCGTATCCTGCGCGGCAGCGGCATTGCGCTGATGGTCTATGTCGGACTGGTCGGCCTCGGCTACATGGGCTTCGCCAG CACGCCGACCGGTTTCGTGCCACCGCAGGACAAGCAGTACCTGGTCGCCTTCGCCCAGCTGCCGGACGCCGCCACCCTGGACCGCACCGAGGACGTGATC AAGCGCATGTCGGAAATTGCCGGCAAGCACCCGGGCGTGGAGAACACCGTGGCCTTCCCTGGCTTGTCGATCAACGGCTTCACCAATAGCCCGAACAGCG GCATCGTATTCACCCCACTCAAGCCCTTCGATGAGCGCAAGGACCCGTCGCTCTCGGCGAACGCCATCGCGGCGGACCTCAACGGTCAGTTCGCGCAGAT CCAGGACGCCTTTATCGCCATCTTCCCGCCGCCACCCGTACAGGGCCTGGGCACCATCGGCGGTTTCCGCCTGCAGGTGCAGGACCGCGGCAACCTCGGC TACGAGGAGCTGTACAGCCAGGTGCAGAACGTCATCGCCAAGAGCGCGGACTATCCGGAGCTGGCCGGCCTGTTCACCAGCTATCAGGTGAACGTGCCGC AGGTGGATGCCGACATCGACCGCGAGAAGGCCAAGACCCATGGCGTGCCGATCGACGAGATCTTCGACACCATGCAGGTTTACCTCGGCTCGCTGTATGC CAACGACTTCAACCGCTTCGGCCGCACCTATCAGGTCAACGTCCAGGCCGATCAGAAGTTCCGCCTCGCACCCGAGCAGATCGGCCAGCTGAAGGTACGC AACAACCGCGGCGAGATGGTCCCGCTGTCGACCTTCGTCAACGTTACGGACAGCGCCGGACCGGATCGGGTGATGCACTACAACGGCTTCCTCACCGCCG AGATCAACGGCGCGGCCGCGCCGGGCTACAGCTCCGGTCAGGCCGAGGCGGCCATGGAACGCCTGCTCAAGGCTGAACTGCCAAATGGCATGAGCTACGA ATGGACCGAGCTGACCTATCAGCAGATCCTCGCTGGTAACACCGCAATCTTCGTCTTCCCGCTCTGCGTGTTGCTGGCCTTTCTGGTGCTCGCCGCGCAG TACGAGAGCTGGAGCCTACCGCTGGCGGTGATTCTGATCGTACCGATGACACTGCTGTCCGCCATCACCGGGGTGATCCTGGCCGGTAGCGACAACAACG TGTTCACCCAGATCGGCCTGATCGTGCTGGTGGGCCTGGCGTGCAAGAACGCCATCCTCATCGTCGAGTTCGCCAAGGACAAGCAGGAGGAAGGCATGGA CCGGCTGGGGGCCATCCTCGAAGCCTGCCGCCTGCGTCTGCGGCCGATCCTGATGACCAGCTTCGCCTTCATCATGGGCGTGGTGCCGCTGGTGCTCTCC AGCGGGGCCGGTGCCGAGATGCGTCATGCCATGGGTGTCGCGGTGTTCAGCGGCATGCTCGGGGTGACCTTCTTCGGGCTCCTGCTGACCCCGGTGTTCT ATCTGGTGATTCGCGCCTTCGTCGAGAAACGCGAAGCCCGCAAAGCGGTTTACAAGGAGGCCCGCGCATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AGTTCTTCGCCCTTTCCCTGCTCACACTGGCACTGAGCGCCTGTGCGGTAGGCCCCGATTACCGGGCACCGCAGCAGGAACCGGCGCGTATCGACAGCGC TTCGGCTGGCGAATACGACCACTCACGCTTCGAAGCGGCCTGGTGGCAGCAGTTCGACGACCCGACGCTGGACGCCCTGGTCGGCGAAGCGCTGGCCGAG AACCGCGAACTGCGCATCGCCTATGCCCGCCTACGGGCGGCACGGGCTATTCGCGATGACGTCAGCAATGATCGTCTGCCCACCGTCACCGCGGGCGCCA GCGCCGATATCGGCAAGGCCCAGCAACCCGGCGTGACCGAACAGCGTGTGAATGCCGAACGCTACGACCTCGGGCTGGACATGGCCTGGGAGCTGGACCT GTTCGGCCGCATCCAGCGCCGCCTGGAATCCAGCGAGGCGCAGGCCGATGCCGTCGAGGCCGAGCTCTACCAGCTGCAGGTCAGCCTGATTGCCGAGCTG
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| Amino Acid Sequence |
>hydrophobe/amphiphile efflux-1 (HAE1) family protein
MNFSQFFIKRPIFAAVLSLVILIGGAISLFQLPISEYPEVVPPTVVVRANFPGANPKVIGETVASPLEQAITGVEGMLYMSSQATADGKLTLTITFGLGT DLDNAQVQVQNRVTRTMPTLPTEVQRLGVTVDKASPDLTMVVHLTSPDQRYDMLYLSNYAALNVKDELARLDGIGDVQLFGMGDYSLRVWLDPEKVASRN LTASDVVNAIREQNRQVAAGSLGAPPAPGATDFQLSINTQGRLVTEEEFENIIIRAGEDGSITRLRDIARVELGSSQYALRSLLNNQPAVAIPVFQRPGS NAIEISDSVRARMAELKRDFPEGVDYEIVYDPTIFVRGSIEAVVHTLLEAIVLVVLVVILFLQTWRASIIPLAAVPVSLIGTFAVMHLLGFSLNALSLFG LVLAIGIVVDDAIVVVENVERNIGLGKSPEEATRQAMKEVTGPIIATALVLCAVFIPTAFISGLTGQFYQQFALTIAISTVISAFNSLTLSPALAAALLR SHDAPKDGFSRLLDRIFGGWLFAPFNRMFDRASHGYVGLVRRILRGSGIALMVYVGLVGLGYMGFASTPTGFVPPQDKQYLVAFAQLPDAATLDRTEDVI KRMSEIAGKHPGVENTVAFPGLSINGFTNSPNSGIVFTPLKPFDERKDPSLSANAIAADLNGQFAQIQDAFIAIFPPPPVQGLGTIGGFRLQVQDRGNLG YEELYSQVQNVIAKSADYPELAGLFTSYQVNVPQVDADIDREKAKTHGVPIDEIFDTMQVYLGSLYANDFNRFGRTYQVNVQADQKFRLAPEQIGQLKVR NNRGEMVPLSTFVNVTDSAGPDRVMHYNGFLTAEINGAAAPGYSSGQAEAAMERLLKAELPNGMSYEWTELTYQQILAGNTAIFVFPLCVLLAFLVLAAQ YESWSLPLAVILIVPMTLLSAITGVILAGSDNNVFTQIGLIVLVGLACKNAILIVEFAKDKQEEGMDRLGAILEACRLRLRPILMTSFAFIMGVVPLVLS SGAGAEMRHAMGVAVFSGMLGVTFFGLLLTPVFYLVIRAFVEKREARKAVYKEARA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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