Pseudomonas stutzeri CCUG 29243, A458_09915
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri CCUG 29243 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
ATCGTGCTGGGCATCCTCTACGAGAGCTACATCCATCCGCTGACCATTCTCTCGACACTGCCATCGGCCGGGGTCGGCGCGCTGCTGGCGATCATCCTTA CCGGCGACCAGTTCAGCCTGATCTCGCTGCTCGGGCTGTTCCTGCTGATCGGCGTGGTGAAGAAGAACGCGATCCTGATGATCGACCTGGCCCTGCAGTT CGAGCGCAACGACAGGCTGTCGCCCGCCGATTCGATCCATCGCGCCTGCCTGCTGCGTTTCCGGCCGATCCTGATGACCACCATGGCTGCCATTCTCGGC GCGCTGCCGCTGCTGCTCGGCGGCGCGGAGGGCGCCGAGATGCGCCAGCCGCTGGGTCTGACCATCATCGGCGGCCTGCTGCTGAGCCAGATCCTGACCC TCTACACCACGCCGGTGGTCTATCTGTACCTGGACCGCCTGCGTCATCGTTTCAACAGCTGGCGCGGTGTTCGCACCGATGCCGCCCTGGAAAACCCGCT
|
|
| DNA Sequence for Gene |
>A458_09915
ATGAATCCGTCGTCGCTGAACCCCTCATCGCTGAAGCATGCCCTGCGGCCCCTCGCTGCTGCCGTGCTGGCCCTGTCGTTGGGCGCCTGTACCCTGGGGC CGGACTATCAACGTCCGGAGCTGCCCGTGGCTACCGAATTCAAACAGGCCGAAGGCTGGAAAGCCGCGGCGCCGGCCGATGTGCTGGAGCGTGGCGAGTG GTGGCGGCTTTATGGCGATGCCGAGCTGGACGCCCTGGTCGCCCGACTGAATGTCGACAATCAGAACCTGGCCGCGGCCGAGGCCCAGTTCCGTCAGGCC CGGGCACTGGTACGCGGTGCACGCTCTCAGCTGTTCCCGATCCTTTCCGGCAGCGCCGGCGTGACCCGTTCGGCGCAGGGCAGCGGCAGCTCTGACACCA GCGGCGGCTCGTTCGGCAGTGGCGTCAGCGAAAGCTACGAAGCGGGCCTGAGTGCGTCCTGGGAGGCGGATATCTGGGGCCGGCTGCGGCGCAATCTGGA AGCGAACCGCGCCAGCATGCAGGCCAGCGCCGCAGATTTGGCCGCAGTGCGGCTGAGCCTGCAGGCCGAGCTGGTGCAGACCTACCTGCAGCTGCGGGTG ATCGACGAACATCAACGCCTGCTCGACCAGACCGTCGCGGCTTACGCACGCTCGCTGCGCCTGACCGAGAACCAGTATCGGGCCGGCATCGTGCCGAAAT CCGACGTCGCCCAGGCGCAGACGCAACTCAAGAGCACCCAGGCCCAGGCCATCGACCTGCGCTGGCAGCGGGCGCAGATGGAACATGCGATCGCCGTGCT CATCGGCGTTGCGCCCTCGGAGCTGGATATTGCGGTGCGCGAGGACATCCCGGCGCTGCCGGGCGTGCCGCTAACCGTGCCTTCACAATTGCTGGAGCGT CGTCCAGACATCGCATCAGCCGAGCGCCAGGTCATGGCGGCCAATGCCAACATCGGCGTTGCAGAAGCGGCCTGGTACCCGGACCTGACGCTCTCGGCGA GCGGTGGCTACCGCAACAGCAGCTTCAGCGACCTGTTCAGTGTGCCCAACCGTTTCTGGTCGCTCGGCCCGCAACTCGCGCTGACACTGTTGGACTTCGG CAGCCGGCGCGCCGAACTGGAGCGTGCCGAAGCCAGTTACGACCAGACCGTGGCCACTTACCGGCAGACCGTGTTCGATAGCTTCCGCGAGGTGGAGGAT TACCTGGTGCAGCTGCGGGTGCTGGAAGAGGAGGCGGTTGTGCAGCGCGAGGCGCTGGAGGCGGCACAGGAGTCTCTGCGTCTGATCGAGAACCAGTACC GGGCAGGCACCGTCGATTTCCTCAGCGTTGCCACGGTGCAGACCACCGCGCTGAACAACGAGCGCACCAACCTGACCCTGCTGGGCGATCGGCTGACCGC CAGTGTGCTGCTGATCGCCGCGCTCGGCGGTGGCTGGGATAGTCAGCAGCTGGATCGGCCACCGACGGCTGCGACTTCGCCGGACGCGCCCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TTCCGGACGCGAAGCCGGCACCCAAAAAAAAAGCCCCGCCGGATCGGCGGGGCTTTTGCGTTTTATGCGGCGTCGCTTTCGGCGGTCAATTGCGCTGCTT GCGATTGACGGTCTGGGCTGCCTTGATGATGTCCGCGCCGATCACCGGCTCGAACTGCTGCCAAACCGGACGCATCGCTTCGCGCCAGCGCTCGCGCTCT TCCGGGTTCAGGCTGACGATCTCGGTCGTTCCCGCCTGGCGAATGCGCTCGCGGTCGGCCTGGTTCAGCTCCTCGGCCTCGCGGTTCACCATGTAACTCA CTTCGTCGAGGATGGCTTCCAGCTCGAAACGGATCTTGTGCGGCATGCCCATCCAGAAACGGGTGTTGCTGACCACCATGTAATCGAGCACACCGTGGTC GCTCTCGATGATGTAGGGCTGCACGGTATGCATCTTCTTGCTGTAGATGTTCGACCAGGGATTCTCCGCGCCCTGTACGGTGCCGGTACGCAGGGCGTCG
|
|
| Amino Acid Sequence |
>outer membrane lipoprotein
MNPSSLNPSSLKHALRPLAAAVLALSLGACTLGPDYQRPELPVATEFKQAEGWKAAAPADVLERGEWWRLYGDAELDALVARLNVDNQNLAAAEAQFRQA RALVRGARSQLFPILSGSAGVTRSAQGSGSSDTSGGSFGSGVSESYEAGLSASWEADIWGRLRRNLEANRASMQASAADLAAVRLSLQAELVQTYLQLRV IDEHQRLLDQTVAAYARSLRLTENQYRAGIVPKSDVAQAQTQLKSTQAQAIDLRWQRAQMEHAIAVLIGVAPSELDIAVREDIPALPGVPLTVPSQLLER RPDIASAERQVMAANANIGVAEAAWYPDLTLSASGGYRNSSFSDLFSVPNRFWSLGPQLALTLLDFGSRRAELERAEASYDQTVATYRQTVFDSFREVED YLVQLRVLEEEAVVQREALEAAQESLRLIENQYRAGTVDFLSVATVQTTALNNERTNLTLLGDRLTASVLLIAALGGGWDSQQLDRPPTAATSPDAP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|