Strain | Pseudomonas aeruginosa strain AZPAE14817 AZPAE14817_contig_19, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CAGTTGCTCGAACAGGCTGGGGTGCAGGCGGATGTCCACCATCATCCAGTCGGCCACGATGAACAGCGCCCAGATCAGGAACGCCACCCCGATGGCAGCG CGCCGCTGCATCAGCGAGTTCCAGCTGAGAAACTCGCGAAACTCGTTTTCCAGCTCCTTTTCGAACCGCAACCAACGAAAGCCGTTGCGCAACTGGCGCG CATACGGATTATCCGGCAGACCAGCCTGTACCAGGCTGTCGCGTGCAAGCATGCTGACTCCCCTACCTCGGACCGAACGCTGAAACAGGCCTGGACGACA ATACCCTGGCGCCTCTGCAGCGATGAGTCAAAAAGCCATCACCCGTTACCAGACAATAGGGCATGCGGCGTGCCGAGGCGATACCAACCATCGGCGCAGC GGGACGCCCCGGCGAGCGAATGGCAAGATCCGTGGGCCGACTGGCATTGCGGCCAGGCCCGAAGGACGCCAGACTGCCGCCATCGCCATGAGGTTGTGCC
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DNA Sequence for Gene |
>NR36_RS21235
ATGCCCGAACCGCGCCTGATTGCCTGCCTGATCTATCCCGACGTGATGAGCCTGGACGTGACCGGACCGCTGCAGGTATTCGCCTCGGCCAACGTCGAAC GCCAGCGCCAGGGCCTGCCGCCTTTCTACCGGATACAGGTGCTCGGCGAGCGTAGCGAAGCGGTGCCCAGTTCTGCGGGCATCCGCATCTGCGCCGACCT CGCCTGGCGCGACTGTCCGCCGGAAAGCCTGGACACCCTGTTGGTGCCCGGCGGCCTCGGTGTCGAGGCGCAGTCCCGCAACGCCGACCTGCTCGCCTGG CTGAAAGCCGCCGAACCGTGCATACGGCGGCTCGGCTCGGTGTGTTCGGGAGCGCTGATCCTGGCCGCCGCCGGGGTTCTCGACGGGCGCCCGGCGACCA CCCACTGGGCCGACGTGGCGACGCTGCGCCAGGGGTTTCCCGGCGTCCATGTGCAAGGCGACCGCCTGCACACCTACGACCCGCGGTGCCGCGACGGCGA CGCCCACATCTTCACCTCGGCCGGCGTCACGGCGGGAATCGACCTGGCCCTGGCGCTGGTCGAGGCCGACCTCGGCCGCAGCCTGGCGCTCAGCGTCGCG CGACGCCTGGTAATGTTCCTCAAGCGTCCTGGCGGCCAGGCCCAGTTCAGCGCCTGGCTGACCCCGGAACCGAGCCGCACCCCGCGCCTGGCCGCGCTGC TGGAGTGGATTCCCGCCAACCTCGCCGGCGACCTGTCCCTGGAAGCCCTCGCCGACCAGGCCTGCATGAGCCCACGTACGTTGTCCCGGGTATTTCTCCA GGAACTGGGCGTGGCGCCCGGTCGCTACGTCGAGCGGGTTCGCCTGGAGGCCGCGCGCGCCCTGCTGCAGGATGCCCAGGCGTCGATCGCCACGGTGTCC CGGCTGTGCGGCTTCGGCCATCCGGAAAACCTCCGGCGGACGTTCCACAAGCATCTTTCGGTCAGCCCCCAGGAATACGCCGAACGCTTCGGCATGCTGG CCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CGCTCCCACCGAGGACCTTCCCATGCTGGAACTGCGCCCCAACTGCGAGTGCTGCGACCGCGACCTGCCCGGCGACAGCGGCGACGCGCTGATCTGCACC TTCGAGTGCACCTTCTGCCGCGATTGCGCGACGACCCGCCTGGGCGGCCAGTGCCCGAACTGCGGCGGCGAACTGCTGGCCCGGCCAAGGCGTCCGCGGG ATGCGCTGGTCCGTCAGCCTGCCTCCAGCCGACGCGTCGTCAGGCCCGGCGGTTGTCCGGAGTGACGCCATGCTGCTACGCAACCCGACCCTGCTCCTGC TGTTCTGCGGCCAGGCCCTGTACTGGTCCTGCTCGCTGATCGGCATAACCCTGACCGCCCTGGTCGGCGTCCAGCTGGCGCCGTTGAACAGCCTGGCTAC CCTGCCCCTGGCCCTGCTGGTGCTGGGCAACCTGCTGGCGGTGCAGCCGTTGTCGCACTTCATGCAGCGCCACGGCCGACGTCCCGGGCTGATGCTCGGC
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Amino Acid Sequence |
>transcriptional regulator
MPEPRLIACLIYPDVMSLDVTGPLQVFASANVERQRQGLPPFYRIQVLGERSEAVPSSAGIRICADLAWRDCPPESLDTLLVPGGLGVEAQSRNADLLAW LKAAEPCIRRLGSVCSGALILAAAGVLDGRPATTHWADVATLRQGFPGVHVQGDRLHTYDPRCRDGDAHIFTSAGVTAGIDLALALVEADLGRSLALSVA RRLVMFLKRPGGQAQFSAWLTPEPSRTPRLAALLEWIPANLAGDLSLEALADQACMSPRTLSRVFLQELGVAPGRYVERVRLEAARALLQDAQASIATVS RLCGFGHPENLRRTFHKHLSVSPQEYAERFGMLA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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