Strain | Pseudomonas aeruginosa strain AZPAE14817 AZPAE14817_contig_17, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TCCGGTGCGGACGATATGCGTGCCCCACACCAGCAGGGCGACGGCAGAGAGCAGGTCGAGCAGTTTCAGCATGGCGTGGCCCCCCTGGCACTACGACGAA TGGCCAACCTCGCGCCAGGTTCCGCGTGCGTTGCGCCGCGGAGCCCGGACAACGGCGCCAACGGCCACGATGGAAAGGCAGCGTTCAGGCGAGTTGTAAC ACGAACGTCATATTTGGACAGGCGCCCCCCGCGGGAGTTCGTCTCGGCAGCCCGAGCGGCAGGGCGCCTACCCTTCATTCAAGCGTGCGCGCCGGGAAAC GGCGAGGATTTTTTCGCCTTCCGTGCGATGCATGCGTTTGCGCCACAGGCCATGGAATTAGCCGACAGGAAGGGTATCCTTTGCACCTTTTAAAAAGCCC CGGTCTAGAGGGATACAGAGGAGTGGTGCGGATGCGATTTTCGGGGATCAGTGGCTGCCTCTCGGCAGCGGTGTTGGCGCTCGGGGTAGGGGGAGCGCCG
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DNA Sequence for Gene |
>NR36_RS18715
GTGGTTCAGGCCGATGCGCTGGGCGATAGCCTGGAGCAGGCGCACATCCGCAAGGCGACCTTCGCCGCGCCGGCCTGGGAAGGCTATACCAACGCCGACG GCAGCGGTCTGTACTGGGACCTGCTGAAGCAGGTCTATGCGCCCTACGGGCTTGACGTGAAATTCATCAACATGCCCTGGAACCGCGCCAACAAGCTGAT GACCGCGGGCTCCATGGTCGATGGCGTGCCGGGCGAGATCCCCGGCGTTGAGGGCAAGCTGTACGCCCAGTTGCCGATCGACATCGAGTACCACGGCGTG ATGCATGCGGCGAAGACGCCCTTTTCCGGCCGCGCCAGCCTCACCGGCAAGCGCGTCGGCTGGCGCCATAGCTACAACCTGATCCCCGCGGAGCAGCGCG ACTTCACCCTGGTCGAGTGCGTCCGCCCCGAGCGTTGCACCGAGCAGGTCCAGAACGGCGAGCTGGATTTCTTCCTCGACGAGCCGGACGAACTGGAAAA GCAGCGCAGCGAAGCGCATCTGCCGGCCGATGCCTATCCGATCGCGCAACTGCCGCCCGGCAAGGAGTCCTTCATGACCTTCGCCGACAGCGCCAGCGGC CGGCTCCTGCGCGAGGTCTATGACGCGCGGGTACGGCAGATGGCGGCGTCCGGCGAGCTGCGGGCGCTCTACCAGCGCTGGAACAGCGAGGTGCCCGGCG CCGTGCAGGCCCTTTCGGCGCAGTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TGCGCCGCTCATTTCCACCGCGGAGCCTTTCCGGGGCTTGCGCGGCGGGAATGAAACGCCTAGGATTCGCCCTTCATTTCCCCCACTCACGCACCGCAAA GGAGGTTACATCGATGATTCAGTTCTCTACCCTTTGCAGGCTGCGCCTGGCCTAACGGCCACCGAAACCTACCGCTCGACTCCCTGCACCGCTGAACGAT TCCCGCCCTTGCGTCCGCGCAAGCTTCCGGCGAGAGGTCATCGGCTGCCGCGGTCACCGCTCCCCAGGTTTTCACTTCTCCGTTAGACGCCCTTCGCCCT TCCGCGAGTGCCCGCTCGGCTTCGGTCTGCCCCCCGGATCTACCGTTTCAATCACATGGATTGGATTATGGGCAACTACATCAAGCCTTTGTCCGCGGGC GTCGCACTGATCGCCTCGGACAGCACCTGGATCGAAGGCAAGGCGATCCAGCAACTGCAAACCACCGCCGAGCTGGACGGCATGCGCCGCGTCGTCGGTC
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Amino Acid Sequence |
>hypothetical protein
MVQADALGDSLEQAHIRKATFAAPAWEGYTNADGSGLYWDLLKQVYAPYGLDVKFINMPWNRANKLMTAGSMVDGVPGEIPGVEGKLYAQLPIDIEYHGV MHAAKTPFSGRASLTGKRVGWRHSYNLIPAEQRDFTLVECVRPERCTEQVQNGELDFFLDEPDELEKQRSEAHLPADAYPIAQLPPGKESFMTFADSASG RLLREVYDARVRQMAASGELRALYQRWNSEVPGAVQALSAQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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