Pseudomonas aeruginosa AZPAE14817, NR36_RS15655

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0006355	regulation of transcription, DNA-templated	ISM Inferred from Sequence Model Term mapped from: InterPro:PF00196	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0003677	DNA binding	ISM Inferred from Sequence Model Term mapped from: InterPro:SSF46894	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Pfam	PF00196	Bacterial regulatory proteins, luxR family	IPR000792	Transcription regulator LuxR, C-terminal	180	234	9.8E-18
NCBIfam	TIGR03541	JCVI: LuxR family transcriptional regulatory, chaperone HchA-associated	IPR019941	Transcription regulator LuxR, chaperone HchA-associated	5	241	4.5E-109
SMART	SM00421	luxrmega5	IPR000792	Transcription regulator LuxR, C-terminal	178	235	3.7E-19
CDD	cd06170	LuxR_C_like	IPR000792	Transcription regulator LuxR, C-terminal	181	237	1.44342E-11
Gene3D	G3DSA:1.10.10.10	-	IPR036388	Winged helix-like DNA-binding domain superfamily	177	241	1.3E-20
PRINTS	PR00038	LuxR bacterial regulatory protein HTH signature	IPR000792	Transcription regulator LuxR, C-terminal	211	223	2.1E-10
PRINTS	PR00038	LuxR bacterial regulatory protein HTH signature	IPR000792	Transcription regulator LuxR, C-terminal	181	195	2.1E-10
SUPERFAMILY	SSF46894	C-terminal effector domain of the bipartite response regulators	IPR016032	Signal transduction response regulator, C-terminal effector	174	241	4.42E-19
Gene3D	G3DSA:3.30.450.80	-	IPR036693	Transcription factor LuxR-like, autoinducer-binding domain superfamily	6	169	6.5E-21
PANTHER	PTHR44688	-	-	-	95	239	6.8E-23
Coils	Coil	Coil	-	-	243	243	-
Pfam	PF03472	Autoinducer binding domain	IPR005143	Transcription factor LuxR-like, autoinducer-binding domain	21	163	3.5E-26
PRINTS	PR00038	LuxR bacterial regulatory protein HTH signature	IPR000792	Transcription regulator LuxR, C-terminal	195	211	2.1E-10
SUPERFAMILY	SSF75516	Pheromone-binding domain of LuxR-like quorum-sensing transcription factors	IPR036693	Transcription factor LuxR-like, autoinducer-binding domain superfamily	8	171	1.83E-16

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.