Strain | Pseudomonas aeruginosa strain AZPAE14817 AZPAE14817_contig_14, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
CGCTCGACGAAGCGGCCAAGCTGCGCGCGGTCAACGACTTCTTCAACCGGTCGCTGCGTTTCACCGACGACATCGAGATCTGGCAACAGGAAGACTATTG GGCGACTCCGGTCGAGGCGCTGGTCAAGGGCGCCGCCGACTGCGAGGACTACGCCATCGCCAAGTACGTGACCCTGCGTCGCCTCGGCGTCGCCAGCGAC AAGCTGCGCATCACCTACGTCAAGGCCCTGCGCCTGAACCAGGCGCACATGGTGCTGACCTGGTACGCCAGCCCGGGCGCCGACCCACTGGTGCTGGACA ACCTGATCGGCGAGATCCGCCCCGCTTCGCAACGCGACGACCTGTTGCCGGTGTACGCCTTCAATGCCGAGGGCCTCTGGCTGCCCGGCGCCGACGGCGG ACGCCGGACCGGCGACAGCAAGAAGCTGTCGCGCTGGCAGGACCTGCTGACCAAGATGCGCGCCGAAGGCCTCGACCTCGACGCCCCCAAGGAGGATTGA
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DNA Sequence for Gene |
>NR36_RS15165
ATGTCACTGCTCAAGCAATTGTTCCTCGCCATCTGCCTGTTCCTCGTCGTCGCCTTCAGCGGCAGCTTCGTCAGCAGCGTGGAGAACTCCCGCGAGCAGT TGCGCGGCCAGTTGCGCTCCCACGCCCAGGACGCCGCCACCGCCCTCGGCCTGTCCCTGACGCCACACGTGGACGACCCGGCGATGGTGCAACTGATGGT CAGCTCGATCTTCGACAGCGGCTACTTCGCCAGCATCCGGGTGATCGACATCAAGAGCGGCAAGCCGCTGGTCGAGCGCGTGCAGGCGCATGCCGAGCGT ACGGTGCCCGGCTGGTTCGAACGCCTGGTGGATCTCCAGCCCCAGGGTGGCGACGCGCTGATCATGCGCGGCTGGGAACAGGCGGCGCGGGTCGAGGTGG TCAGCCATCCGCAATTCGCCCTGGCGCGCCTGTGGGACAGCGCCCTGGGCAGCCTCTACTGGTTGCTGGCCTGCGGCGCGGTGAGCCTGCTGCTTGGCGG CTGGCTGCTGCGCCGCCAACTGCGCCCGCTCGACCAGATGGTGCGCCAGGCCCATGCCATCAGCCGGCGGGAATTCCTCAGCCTGCCCAGGCTGCCGCGC ACGCCGGAGCTGCGCCGCGTGGTGCAGGCGATGAACCAGATGGTGGAGAAACTTCGCACGCTGTTCGCCGAGGAGGCCGCGCGTAGCGACAAGCTACGCG CCCAGGCCTACCAGGACAGTCTCACCGGCCTGCCCAACCGGCGCCTGTTCGACGCCCGCCTCAACGAACAGCTGGGTGCCGGCGAGCACGAGCATGCCGG GCAGCTCCTGCTGCTGCGCCTGAACGACCTGAACGGGCTGAACCAGCGTCTCGGCGGGCAACGCACGGATGAACTGATCCAGGCGGTCGCCCGCTTGCTG GTCGACTCCTGCGGCCAGCAAGGGCGCGCCGACTGGCTGCTGGCCCGCAGCCGCGGCGGCGAGTTCGCCGTGCTGGCTCCCGGTTGCTCCCGCGAGCAGG CCGAACGCCTGGCCGAGGAACTCTGCGAAGGCCTGGAGAACCTTGCCCGCACCGGTGCCAGCGATCTCACGCCGGTCGCCTATCTCGGTATCAGCGCGTT CGCCGAAGGCGACTCGCCCGCGGATCTCCTGGCCCGTGCCGACCAGGCCCTGGCCCAGGCCGAAAGCCAGCCCGCCCAGCCCTGGGCGAGCCAGGACGGC ACCGCGCTCGCGGCGCTCAACGACAGCCAGGACTGGCACGACTGGATCGACCAGGCCCTGACGGAGCGCCGCCTGCTGCTCTATTTCCAGCCGGTGGTGG ACTGCCTGGACACCCAGCGCGTCCTCCACCACAAGGTCCTCGCGCGCCTGCTCGACCCGCAGGCCACGGCCATCGCCGCCGGGCGCTTCCTGCCCTGGAT AGAACGTTTCGGCTGGGCCGCGCGTCTCGACCTGGCGATGCTCGAACAGAGCCTGGAGCACCTGCGGCGCCATCCACGGCCGCTGGCGCTGAGCCTGTCG GCCGCCAGCGTCCGCAATGCGCAGGCGTTCGCCCCGCTACTGGCCCTGCTCAAGGCGCATCCGCAGGAGGCGCGCCAGCTGACCCTGGAACTGGACGAGC GGCACCTGCCATCCGCGGCCGAACTGGAGCGCCTCAGCCAGGTCCTGCGCGAACTGGGCTGCGGTCTCGGCCTGCAGCATTTCGGCGGCCGCTTCAGCCT GATCGGCAACCTTACCCATCTGGGGCTGGCCTACCTCAAGCTGGACGGCTGCTACCTGCACGCCGTCGACCGGGAAGGCGACAAGCGGTTGTTCATCGAA GCGGTCTATCGCACCACCCACAGCATCGATCTACCGTTGATCGCGGAACAGGTGGAAACCCTCGGTGAACTCGAAGTACTGCGGGAAATGGGCTTGCGTG GCGCCATGGGACGCCTGTTCGGCAGCCCGGCGCCCTGGTCCGGGGATGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TAGCGAGTCCGGAGCGGGTCGGACTCGCTTTACAGCGGATTCGGCATCGACGCCAGGCGCTCCCTCTCCGACAGAGAACGCGCCGGCGCGAGCCGACAGG TCCCCGTCATGAAACCGCCAGTCGCTGTTCCACCAGCACTCCCCCGTAAAGCGCGATCTGGGTCTTGGCATTGAGTTCGATACGCAAGGCCACCGCGCGC TCGATGCCGATCTTCAGGTGCGGACCGAAGCGCGATACGTCCAGGCCGGCACGGATCATCATCTTCTCCACCCCTACGGTGGTTACCGTCACCAGCGTCT GGATGTCGTTCTGCAGGCTGTAGCGGGCCAGCGCGCGCATCGCCTCCAGCGTACAGTCGGAAAAGCCCAGCGAGCCTTTCTGTCCAGAGTTGATGGCGAA ACGGCTGAGTTCCCAGATGTGCGGCGAGCAAGGCGCTTCCTTGCCGTGCAGAAGCTCCGGGAAGGTGTTCTTCAGCATGTAGGGGCCAGTGGTATCGAGA
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Amino Acid Sequence |
>DeoR family transcriptional regulator
MSLLKQLFLAICLFLVVAFSGSFVSSVENSREQLRGQLRSHAQDAATALGLSLTPHVDDPAMVQLMVSSIFDSGYFASIRVIDIKSGKPLVERVQAHAER TVPGWFERLVDLQPQGGDALIMRGWEQAARVEVVSHPQFALARLWDSALGSLYWLLACGAVSLLLGGWLLRRQLRPLDQMVRQAHAISRREFLSLPRLPR TPELRRVVQAMNQMVEKLRTLFAEEAARSDKLRAQAYQDSLTGLPNRRLFDARLNEQLGAGEHEHAGQLLLLRLNDLNGLNQRLGGQRTDELIQAVARLL VDSCGQQGRADWLLARSRGGEFAVLAPGCSREQAERLAEELCEGLENLARTGASDLTPVAYLGISAFAEGDSPADLLARADQALAQAESQPAQPWASQDG TALAALNDSQDWHDWIDQALTERRLLLYFQPVVDCLDTQRVLHHKVLARLLDPQATAIAAGRFLPWIERFGWAARLDLAMLEQSLEHLRRHPRPLALSLS AASVRNAQAFAPLLALLKAHPQEARQLTLELDERHLPSAAELERLSQVLRELGCGLGLQHFGGRFSLIGNLTHLGLAYLKLDGCYLHAVDREGDKRLFIE AVYRTTHSIDLPLIAEQVETLGELEVLREMGLRGAMGRLFGSPAPWSGDA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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