Pseudomonas stutzeri CCUG 29243, A458_04610

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00441
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003995 acyl-CoA dehydrogenase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:cd01156
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0050660 flavin adenine dinucleotide binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:1.10.540.10
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG psc00280 Valine, leucine and isoleucine degradation 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG psc01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
FunFam G3DSA:1.10.540.10:FF:000022 Isovaleryl-CoA dehydrogenase isoform 2 - - 2 124 2.6E-58
PIRSF PIRSF016578 PIGM - - 131 387 9.7E-11
Pfam PF02770 Acyl-CoA dehydrogenase, middle domain IPR006091 Acyl-CoA oxidase/dehydrogenase, middle domain 127 222 2.8E-27
Gene3D G3DSA:2.40.110.10 - IPR046373 Acyl-CoA oxidase/dehydrogenase, middle domain superfamily 126 238 8.4E-43
FunFam G3DSA:2.40.110.10:FF:000004 Isovaleryl-CoA dehydrogenase, mitochondrial - - 126 239 5.3E-57
SUPERFAMILY SSF56645 Acyl-CoA dehydrogenase NM domain-like IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily 4 247 1.31E-88
CDD cd01156 IVD IPR034183 Isovaleryl-CoA dehydrogenase 9 384 0.0
Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain IPR009075 Acyl-CoA dehydrogenase/oxidase, C-terminal 234 382 9.3E-42
SUPERFAMILY SSF47203 Acyl-CoA dehydrogenase C-terminal domain-like IPR036250 Acyl-CoA dehydrogenase-like, C-terminal 233 385 3.22E-46
PIRSF PIRSF016578 PIGM - - 12 108 1.3E-4
FunFam G3DSA:1.20.140.10:FF:000003 isovaleryl-CoA dehydrogenase, mitochondrial - - 240 384 2.4E-79
Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal 14 123 7.4E-38
PANTHER PTHR43884 ACYL-COA DEHYDROGENASE - - 12 385 0.0
Gene3D G3DSA:1.20.140.10 - - - 239 382 2.7E-46
Gene3D G3DSA:1.10.540.10 - IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily 1 124 8.4E-41

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.