Pseudomonas stutzeri CCUG 29243, A458_00685
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri CCUG 29243 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
TCAGCGTGCGTCCGCACTTCAAATACATGGGCGCGGATTTCACCCTGTCGCTGGTCGGCAAGCTGGACAAGGAATAAGCACTTGAACGGATACGGCAGCC TCTTCGAACGCCTCGGCGGTGACGCCGCACGGCGCTCTGGCTGGAGCCGCGAAGTCGCGGCGATGGCCTCGGTGGCTGCCCATCTGGCCAAGATGCTCAG CACCCGAGCGGGCAGCGTGCAGACGCTGCCCGACTACGGGTTGCCCGATCTCAACGATATGCGCCTGTCGCTGCACGACTCGCTGCAGCAGGCGCGTATC GCCATCGAACGTTTCATCGAAGCGTACGAACCCAGGTTGACCCAGGTGCGCGTGCTGTCGCTGCCGCGCACCCACGATCCACTGACCCTCGCCTTCACCA TCGAGGGCCTGCTGGAAGTGGATGGTCTCAAGCGCCAGGTCAGCTTTTCCGCCAGCCTCGATGGCAGCGGGCAGGTCAAGGTCCAGTAAGGAGACAACGG
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| DNA Sequence for Gene |
>A458_00685
ATGTCAGGCAAACCCGCAGCCCGCCTAGGCGACCCTACCGACTGCCCCAAGAAGGGTCACGGCACCAACCCCATCGCCGCCGGCTCGCCCGACGTGCTAT TCGACGGCCTGCCGGCCGCACGCATGGGCGACGCCTCCGCCTGCGGCGGTGCGATGGCCAGCGCGGTAATCCCCAACGTGCTGATCGATGGCAAGCCGGC GGCGGTGGTGGGCAGTGTGGGTAACCACGGCAATGTCGTCACCGCCGGTTCGGGTACGGTGGTCATCGGCAGCAGCCACAGCCCGGCGCCCTTCCTTGCG CCCGAAGTGCTCGGCATTGCGTCCGCTGCGATTGCTGCGGCAACCAACGCGGTAGAGTCCCTTCTCCCGAGCTCACCGCTGGCCCGAGCCTGGCAGGAAG AGCCGGGTGATCTCGCGCCGTTGGGCTTGGAAGAAGAAGACGAAGAAGAGGAACTGGTCGAACAGCCGCAGCAACAGGCGCGCCAGGGCATCACCCTGCG AATCGGCGTGTTCTTCGATGGCACCGGCAACAACCTGGCTAATGCTGCCGTGACCGAAAAGTGTCGTCAGGACGACCTGACCCTGCTGGACGAGCGCACC CTCGGGGAGGTCGTCGAGTATTGTAGGGCGCATGGTTTCGGCGGTAGCGAAGGCAACGGCTTCTTTACCCAGACACCGGACAACAGCTACGGCAACGCGC CGAGCAACGTAGCGCGGCTGTTCGACCTGTACAAGGACGATGCGACCCGGAGCCTGGCTAAGGACGAGCGTAGCGCCAGCATCAAGGCGTATCTCGAAGG CATCGGCACCAGCAGCGGGGAAGAAGACTCGGTGTACGGGCAAGGGACTGGTATGGGCGATACCGGCGTAGTGGCCCGGGTGATGCAAAGTCCGCAGAAG ATCCAAGAGTCGCTGGGTCGCCTGCTGGGTAATAACCCCAATCTGGAAATCGAAGGGTTGGAACTCGACATCTTTGGATTCAGTCGCGGGGCTGCTGCGG CCCGTCACTTCGCCAACGAAATACTCAAATCGGAAAGCGGCATCCTGGCGAGTTTATTCAATGCGCAGGCGCCGGGGTTTAACGCGAAATTCGACTGGGC CACCAACGTTCAGATTAACTTCATCGGTCTGTTCGATACGGTGGCGGCCGTGGCCGACCCGTTGAGCTGGGACTTCAGCCCTGCGGACCACCACAATCCA GGTGTCAACCTGTACCTCCCGCCAGATTGTGCGCGCAAAGTGCTTCAGCTGAAGGCCCGTGATGAGATGCGCTGGAACTTCGCGCTCAATAGCGTGACCC CACATCATCAAGAGATAACCCTCCCCGGCGCGCACTCGGATATCGGTGGCGGCTATCTTCCGGTTGTGCAGGAAAAGCTGATCCTAAGTCGCCCGGTCAG CTCCACGGTGCCCGCGGACACACCAACTGAACGTACTCACGCCTGGCGCGAAACCGAGCGCCAATACGAAAAGTGGAAGGCTTTTGGCCTGCCGGATGAT CAGATTAAAAAAGACGTTCGCCGCATCCGCAAACTCCACCCCCGCGGTGTCAACCATCCGCCGGAGGATTGGGTGTTAGGCCTGGTAACTATTGATCGTC CGATCCGCGGCGAGCTTTCGCTGGTGTATTTGCGTGTGATGCGGGAACTGGCTGCCGAACATGGGGTTCCGGTCAAAGCCGTTCCCGACACGCCGAGTTT GGCGATTCCGTTTGAGCTCCAAGACATTGCCAAAAAAATGATGGCCTATGCCAACGGCAGCCGGTATGACCTAAACGAAGACGAAGAGCATTTGCTCCGA TCGAGGTATATCCACCTATCCGCGCACTGGAAGCCCACCAGCGGCCTGCTTATCAGCAAGCCAGCGCCCAATGTGCGCTTGGTCTACAACAACAAGCCAC AGCAGGGCTATCCGGAATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
AAACTCTTGTTCTCGCTTGCGCAATCCTTTTGCTCAGCGGCTGCACCAGCAGCCAGGCTCAACCGAAACTGCCCTATAACGCCTGGTATGTCGGTGTATT CGCACCTGAGCACATGGAAGTCTGGGTGGAAAGCGTGGATGTGATCGACCGCCGGGGGCTGGCCTACGAGCGCGTCAGTGGCGGGGTCCCTTCCTATACA GGCAAGGTCGTCGGCTGGCCCAAGCATCCAGCGGGGGGTGCAGGCAAGGACCTGCCAGGCATCGACCTGCCGGAAATCGTATTTGTGCGCTGGCAGTCGT TCGTTGAGCCGCAGACCTACAACGTACGCATCAATATTCCCGAATGGGTGCGCAAGGAGATGCTCAAGCCTCAGCGTGGCTATTGCCACTTTCAGGGCAA GTGGTTGGATGGACAATTTCGCAAAGACATAACCATCGGCTTGGCCCCGGGTGGCATCGCCAAAGCCTGGGTAGGCGGACCCTGCCTGCAATCCATCGAG
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| Amino Acid Sequence |
>Rhs element Vgr protein
MSGKPAARLGDPTDCPKKGHGTNPIAAGSPDVLFDGLPAARMGDASACGGAMASAVIPNVLIDGKPAAVVGSVGNHGNVVTAGSGTVVIGSSHSPAPFLA PEVLGIASAAIAAATNAVESLLPSSPLARAWQEEPGDLAPLGLEEEDEEEELVEQPQQQARQGITLRIGVFFDGTGNNLANAAVTEKCRQDDLTLLDERT LGEVVEYCRAHGFGGSEGNGFFTQTPDNSYGNAPSNVARLFDLYKDDATRSLAKDERSASIKAYLEGIGTSSGEEDSVYGQGTGMGDTGVVARVMQSPQK IQESLGRLLGNNPNLEIEGLELDIFGFSRGAAAARHFANEILKSESGILASLFNAQAPGFNAKFDWATNVQINFIGLFDTVAAVADPLSWDFSPADHHNP GVNLYLPPDCARKVLQLKARDEMRWNFALNSVTPHHQEITLPGAHSDIGGGYLPVVQEKLILSRPVSSTVPADTPTERTHAWRETERQYEKWKAFGLPDD QIKKDVRRIRKLHPRGVNHPPEDWVLGLVTIDRPIRGELSLVYLRVMRELAAEHGVPVKAVPDTPSLAIPFELQDIAKKMMAYANGSRYDLNEDEEHLLR SRYIHLSAHWKPTSGLLISKPAPNVRLVYNNKPQQGYPE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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