Strain | Pseudomonas stutzeri DSM 4166 chromosome, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
TGGTCAGCCGCACAGGCGAGCTGGAAAAGCACAAGGCCAAGACCATCATCGTGGTCGACGCCATGGGGCAGCACGCCGGAACGGCCTGCCGAGAGCTGCA GAAGGCAGGCTTCACCGCCGCCAAGTTGTCGGGAGGGATTTCCAGCTGGCGCGGCGACAATCTGCCAGTGGTCAAGTAATCATGCCCAACGTCGTCATCT ATACCACCGCCTGGTGCCCGTTCTGCATCCGCGCCAAGGCGCTGCTCGATCGCAAGGGTGTCGCCTACGAGGAAATTCCCGTTGATGGCAACCCGACCCT GCGCGCCGAGATGGCCAGCAAGGCCGGACGCACCTCGGTGCCGCAGATATGGATCGGCGATAAGCACGTCGGCGGCTGCGATGAGCTGCACGCTCTGGAG CGCGCCGGACGCCTCGACCCGTTGCTGCAGGCCTGAGGCCGGCACCGCGGGTCCGCGAACAATTCAAACGACACGCACAACTGGATAGAAGGTTGCAGAA
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DNA Sequence for Gene |
>PSTAA_4229
|secB
ATGACCGAACAAGCTAACAACGGCGGCGCAGCGTCGCAGAACGAACAGGGCGCGCAGTTCTCCCTGCAGCGCATCTACGTCCGCGACCTGTCCTTCGAAG CGCCGAAGAGCCCGGAAATTTTCCGTCAGGAATGGAATCCGAGTGTCGCGCTGGACCTGAACACCAAGCAGAAGCAGTTGGAAAGCGACTTCTACGAAGT GGTGCTGACCCTCTCGGTCACCGTCAAGACCGGTGAGGAAGTGGCCTTCATCGCCGAGGTGCAGCAGGCCGGCATTTTCCTGATCAAGGGCCTGGAAGCT GCTGCGATGAGCCACACGCTTGGTGCGTTCTGCCCGAACATCCTCTTCCCTTATGCCCGCGAAGCGCTGGACAGCCTGGTGACCCGCGGCTCCTTCCCGG CGCTGATGCTGGCTCCGGTGAACTTCGATGCGCTGTACGCCCAGGAAATGGCGCGCATGCAGAGCGCCGGCGAGGCACCCGCCACCGCCCATTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
TCCGATCGGATCGTGCAGGAAGCGTCTGACGCTTCCTGCAGTCCCCTAGGTGCGTTCTTAGCGCACCTGCACCACCAGCTTGCCCACAGCCTTGCGCTGA CCCAGCGTGGCAATGGCCTGGCCGGCTTCCTCCAGCGTGAAGCGTTGCGACACCAGCGGCTTGAGCTTGCCTTCGGCGTGCCAGGCGAACAGCTGGCGGA AATTCGCAGCGTTGTCCTGCGGCTGGCGTTGGGCGAAGGCGCCCCAGAACACGCCGATCAGTGCCGCACCCTTGAGCAGCGGCAGGTTGGCCGGTAGTGC CGGGATATCGCCGCCGGCGGCAAAGCCGACCACCAGCATGCGACCGTTCCAGGCGATGCTGCGGAAGGCCTCCTCGAACAGCTTGCCGCCCACCGGGTCG TAGATCACATCCACGCCCTGGCCGCCGGTAAGTTCCTTCAGCCGCTCCTTCAGGCTCACTTCGCTGTAGTTGATCAGCTCGTCGGCGCCGGCATTCCTCG
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Amino Acid Sequence |
>preprotein translocase subunit SecB
MTEQANNGGAASQNEQGAQFSLQRIYVRDLSFEAPKSPEIFRQEWNPSVALDLNTKQKQLESDFYEVVLTLSVTVKTGEEVAFIAEVQQAGIFLIKGLEA AAMSHTLGAFCPNILFPYAREALDSLVTRGSFPALMLAPVNFDALYAQEMARMQSAGEAPATAH
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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