Pseudomonas stutzeri DSM 4166, PSTAA_3864 (mrdA-2)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0009252	peptidoglycan biosynthetic process	ISM Inferred from Sequence Model Term mapped from: InterPro:MF_02081	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0009002	serine-type D-Ala-D-Ala carboxypeptidase activity	ISM Inferred from Sequence Model Term mapped from: InterPro:MF_02081	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0008658	penicillin binding	ISM Inferred from Sequence Model Term mapped from: InterPro:SSF56519	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Cellular Component	GO:0016020	membrane	ISM Inferred from Sequence Model Term mapped from: InterPro:MF_02081	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	psr00550	Peptidoglycan biosynthesis	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	psr01501	beta-Lactam resistance	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Pfam	PF03717	Penicillin-binding Protein dimerisation domain	IPR005311	Penicillin-binding protein, dimerisation domain	64	236	1.3E-42
Gene3D	G3DSA:3.30.1390.30	-	-	-	85	161	1.1E-48
SUPERFAMILY	SSF56519	Penicillin binding protein dimerisation domain	IPR036138	Penicillin-binding protein, dimerisation domain superfamily	56	250	2.35E-50
NCBIfam	TIGR03423	JCVI: penicillin-binding protein 2	IPR017790	Penicillin-binding protein 2	20	607	0.0
PANTHER	PTHR30627	PEPTIDOGLYCAN D,D-TRANSPEPTIDASE	-	-	11	613	0.0
Hamap	MF_02081	Peptidoglycan D,D-transpeptidase MrdA [mrdA].	IPR017790	Penicillin-binding protein 2	3	611	51.931419
Pfam	PF00905	Penicillin binding protein transpeptidase domain	IPR001460	Penicillin-binding protein, transpeptidase	268	604	1.2E-69
Gene3D	G3DSA:3.40.710.10	-	IPR012338	Beta-lactamase/transpeptidase-like	250	619	2.7E-100
Gene3D	G3DSA:3.90.1310.10	-	-	-	64	246	1.1E-48
SUPERFAMILY	SSF56601	beta-lactamase/transpeptidase-like	IPR012338	Beta-lactamase/transpeptidase-like	251	607	1.05E-98

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.