Strain | Pseudomonas stutzeri DSM 4166 chromosome, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
CGGCAACAACGACGCCGACGCGGTCCTGCTGCTGCAATGGGTCGAGCAGCACCTGCCGGAACATCGCGAGCGCCTGGAAGGCATGCTGCGCGCATGGGGC GGCAACGCCTCGGGCAGCGGCATCGCCAACATCGACAACATCGGCGACGTGCACCCGGACACCTACTGGTGGCAGCACACCGTGGGCAACGTGCGCCGCC AGCGTTTCAGCGACATCTGGCTGCACGCGCCGGCCCCACTGCTGCAGGAGCTGCGCCAGCATCCGCGAGCGGTGAATGGCCGCTGTGCCGAATGCCGCTG GCTGTCGATCTGCAACGGCAACACCCGTACCCGCGCCTGGGCGCAAGGCGACCTCTGGGCCGAGGACCCGGGTTGCTACCTCTCCGACGAGGAGATCGGT CTGCCGACACCCGAGCGCATTCCCAGCATCGCCATTTGATCGAAGCGGCCGCCAAGCGCCGCCCGCACACCGTAGTCCGATGAGCATTCAGGAGCACCGC
|
|
DNA Sequence for Gene |
>PSTAA_3634
|nirE
ATGGACCAGCCACTCACACTTCCCGCTTCGCTGAGCGCCGCGTTCGCCCCCGGCGAAGTCGCTCTGGTCGGCGCCGGCCCGGGTGATCCCGGCCTGCTCA CCCTGCGTGCCTGGAGCCTGCTGCAACAGGCCGATGCGGTGGTCTACGACCGGCTGGTCAGCGATGCCCTGATGGACCTGCTGCCCGCCGCCTGCAGCCG CCACTATGTCGGCAAGACCAGCGGTTATCACAGCCTGCCGCAACCGGAAATCAATCAGTTGCTCGCCGACCTGGCAAAGCAGAACAAGCGCGTGGTGCGG CTCAAGGGCGGCGACCCGTTCATCTTCGGTCGCGGCGCCGAAGAGCTGGAGTTCCTTCTGCAGCGCGGCATCGACTGCCAGGTGGTGCCGGGCATCACCG CCGCAGCCGGTTGCAGCGCCTATGCTGGCATCCCGCTGACCCATCGCGACCTGGCGCATTCCTGTCAGTTCATCACCGGCCACCTGCAGACCAACGGCGA ACTGCACCTGCCGTGGGACTCACTGGCCCAGGGCGGCCAGACCCTGGTGTTCTACATGGGGCTGGCCAGCCTCGGCGAGATCTCGCGCAACCTGATCGCC GCCGGCCTGCCGGTGGATACCCCGGCCGCACTGATCGGCAACGGCACCCGGCCGGACCAGCAGGTGGTGCGCTGCACGCTACGGCAACTGCCGAACATGG CCGACGAGCAGCACCTCACCCCACCGACTCTCACCGTAATCGGCAAGGTGGTGGGCCTGTTCGCCGAGCGCCAGGTCCGCCACCCGGCGCGCCTGCACGG CGACCCGCTCGCCACCGCGGAGGCCTTATGCAACTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
TACCCGCCCTGCTGCTGGCCGCCGCGCTGCCGGCCGCCACCTTCGTCGCCCTCGACATGGCCAGTGCCGCCACGCCGGACGACAGCCAGGCCCTCTACGA ACTGCACTGCCAGGCCTGCCACGGCGTCAACCGCCTCGGTGGCGCCGGGCCGGCGCTGCTGCCGGAAAGCCTCAGCCGCATCAAACCGGCCGAGGCCCAG GCGGTGATCCGCGACGGCCGCCCGGCGAGCCAGATGGCCGCCTATTCACACGTGCTGAATGACGCGCAGATCACCGGCCTGGTCGATTACCTGTATCAGC CCTCGGCCGTGCCGCCGACCTGGAGCGATGCCGATATCCGGGCCAGCCACCGCATCCTCACCGACGTCGCCACCCTGCCGACGACTCCGCAGCACGGCGC CGATCCGCGCAACCTGTTCGTCGTGGTCGAGGCTGGCAATCATCACGTGCGGGTGCTGGATGGCGATCGATTCGAGGAACTGGCCAACTTCCAGTCGCAC
|
|
Amino Acid Sequence |
>uroporphyrinogen-III C-methyltransferase
MDQPLTLPASLSAAFAPGEVALVGAGPGDPGLLTLRAWSLLQQADAVVYDRLVSDALMDLLPAACSRHYVGKTSGYHSLPQPEINQLLADLAKQNKRVVR LKGGDPFIFGRGAEELEFLLQRGIDCQVVPGITAAAGCSAYAGIPLTHRDLAHSCQFITGHLQTNGELHLPWDSLAQGGQTLVFYMGLASLGEISRNLIA AGLPVDTPAALIGNGTRPDQQVVRCTLRQLPNMADEQHLTPPTLTVIGKVVGLFAERQVRHPARLHGDPLATAEALCN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|