Pseudomonas stutzeri DSM 4166, PSTAA_3629 (nirS)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri DSM 4166 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GCACGAAGCGCGTCTTGCCACAGCCGGTCGGGCCCTTGATCAGCACCGGCATGCCGTGCTGCCAGGCCTGCTCGAACAACTGCTCCTCGTTGCCCAGCGG TTGATAGAAAGGCGCGTCCGGCGTGCCAGCGGCGATTCGGATTTCAGGCGCGTTCACAGGCAGTACCTCACGACAGCGGTTGGTTATTTCCATCGCCACG CTACCGGCCCCGTGCGACCCCCTCAAGCCGTGCGCCGGCAAAGCTTGATTGCGGTCAAGTCTGCGTCGAGATCTGCGACGAACAGGCGGCGAAACGAGGC GCTTTGTCGCAGCTGTAGCGGCGATCTCCGCGACAAGGCGTCACGTCTGGGGCATCTCGGGGGGGCTCTTGATTACCGTCAAGCGCCTTCGCTTCCGCGC TCTCATAGCATCCGAATCGCAAAAAGAAGAAGTCCCCGGGAACTGCCACACCGCCGTAACTAGCAGGAGTCGCGCCTGAGCGCTCCCATAGGAGAGAAGG
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| DNA Sequence for Gene |
>PSTAA_3629
|nirS
ATGAGCAATGTCGGTAAACCTATTCTGGCTGGCGTGATCGCCGGCCTTTCGCTGCTAGGTCTGGCAGTCGCCCAGGCTGCCGCCCCAGAGATGACCGCCG AAGAGAAAGAGGCGGCCAAGCAGATCTATTTCGAACGCTGCGCCGGTTGCCATGGCGTTCTGCGCAAGGGTGCAACGGGCAAGAACCTCGAACCGCACTG GACCAAGACCGATGCGGACGGCAAGAAGACCGAGGGCGGCACCCTCAATCTGGGCACCAAGCGCCTGGAGAACATCATTGCCTATGGCACCGAGGGCGGG ATGGTCAACTACGACGACATCCTCACCAAGGAAGAGATCAACATGATGGCGCGCTACATCCAGAACACCCCGGATGTGCCGCCGGAGTTCTCCCTGCAGG ACATGAAGGACAGCTGGAAACTCATCGTTCCGGTTGATCAGCGTCCGAAGAAGCAGATGAACAAGATCAACCTGAAGAACGTCTTCGCCATCACCCTGCG CGATGCCGGCAAGCTGGCGCTGGTGGACGGCGACACCCACACCATCTGGAAGGTGCTGGACACCGGCTACGCCGTGCACATCTCGCGCCTGTCCGCCTCC GGTCGCTATGTCTACACCGTGGGCCGCGACGGCCTGACCACCATCATCGACATGTGGTACGAGGAGCCGACCACCGTCGCCACCGTGCGCCTGGGTTCCG ATGCCCGCTCCGTGGACACCTCCAAGTTCAAGGGCTACGAGGACAAGTACCTGATCGGTGGCACCTACTGGCCGCCGCAGTACTCGATCATGGACGGCGA GACCCTGGAGCCGATCAAGGTCGTCTCCACCCGTGGCCAGACGGTCGACGGCGAATACCACCCCGAACCGCGTGTGGCGTCCATCGTCGCCTCGCACATC AAGCCGGAGTGGGTGGTCAACGTGAAGGAGACCGGGCAGATCATCCTGGTCGACTACACCGACCTGAAGAACCTCAAGACCACCACCATCGAGTCGGCCA AGTTCCTTCACGACGGCGGCTGGGACTACTCCAAGCGCTACTTCATGGTCGCCGCCAACGCCTCCAACAAGGTCGCGGCAGTCGATACCAAGACCGGCAA GCTGGCCGCGCTGGTCGACACCGCGAAGATCCCGCACCCGGGGCGTGGCGCCAACTTCATCCACCCGCAGTTCGGCCCGGTCTGGACCACCGGCCACCTG GGTGACGACGTGGTCTCGCTGATCTCCACCGCATCGGACGATCCGAAGTACGCCAAGTACAAGGAGCACAACTGGAAGGTGGTGCAGGAGCTGAAGATGC CGGGCGCCGGCAACCTGTTCGTCAAGACCCATCCGAAGTCGAAGAACCTCTGGGCCGACGCGCCGATGAACCCCGAGCGGGAAGTCGCCGAATCCGTCTA CGTCTACGACCTGGCCGATCTCAGCAAGGAGCCCAAGCGGCTGGACGTCGCCAAGGACTCCGGCCTGCCGGAAAGCAAGGCGATCCGTCGTGCCACCCAC CCCGAGTACAACGAGGCGGGTGACGAGGTGTGGATCTCCCTCTGGGGCGGCAAGACCGACCAGTCCGCGATCGTGATCTACGACGACAAGACGCTGAAGC TGAAGAAGGTGATCACCGATCCGGCGATCGTCACGCCGACCGGCAAGTTCAACGTCTTCAACACCATGCACGACGTGTACTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCCGCCCGAGGATTGCCTGTTAACACCCACCACGCCCGGCGTGGTGGGTCTGGCAAGGGAACCGATTCCATGACCGATCAAGACGGCAACAAGCAACAAA AGGGCGGCGGCATCCTGGCACTGCTGCGGCGGCCGAGCACGCGCTATTCGCTCGGCGGCATTCTGGTAGTGGGCATCGTTGCCGGCATCATCTTCTGGGG CGGGTTCAACACCGCGCTGGAAGCCACCAACACCGAAACCTTCTGCATTTCGTGTCACGAGATGGGCAACAACGTTTACCCCGAATACAAGGAAACCATC CACTACAGCAACCGCACCGGCGTGCGTGCCACCTGCCCGGACTGCCACGTCCCGCGCGACTGGACGCACAAGATGGTGCGCAAGGTCGAGGCCTCCAAGG AACTGTGGGGCAAGATCGTCGGCACCATCGACACCCAGGAGAAGTTCGAAGCCAAGCGGCTGACGCTGGCCCGACGCGAATGGGCGCGGATGCGGGCATC
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| Amino Acid Sequence |
>cytochrome cd1 nitrite reductase
MSNVGKPILAGVIAGLSLLGLAVAQAAAPEMTAEEKEAAKQIYFERCAGCHGVLRKGATGKNLEPHWTKTDADGKKTEGGTLNLGTKRLENIIAYGTEGG MVNYDDILTKEEINMMARYIQNTPDVPPEFSLQDMKDSWKLIVPVDQRPKKQMNKINLKNVFAITLRDAGKLALVDGDTHTIWKVLDTGYAVHISRLSAS GRYVYTVGRDGLTTIIDMWYEEPTTVATVRLGSDARSVDTSKFKGYEDKYLIGGTYWPPQYSIMDGETLEPIKVVSTRGQTVDGEYHPEPRVASIVASHI KPEWVVNVKETGQIILVDYTDLKNLKTTTIESAKFLHDGGWDYSKRYFMVAANASNKVAAVDTKTGKLAALVDTAKIPHPGRGANFIHPQFGPVWTTGHL GDDVVSLISTASDDPKYAKYKEHNWKVVQELKMPGAGNLFVKTHPKSKNLWADAPMNPEREVAESVYVYDLADLSKEPKRLDVAKDSGLPESKAIRRATH PEYNEAGDEVWISLWGGKTDQSAIVIYDDKTLKLKKVITDPAIVTPTGKFNVFNTMHDVY
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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