Pseudomonas stutzeri DSM 4166, PSTAA_3401
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri DSM 4166 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GCAGCAGATCGATGTCGCTGCCGAGCAGGTCGTCGCCCAGTACGCAGGCGATGCGCGCCGACGCGTGATCTGTGCCCTGTAACTGCTGGCGCAGGCGCGT GGCGGCGGCGGTGGGGTTGGCGGCGCCGCCGTTGGTGACGATGGCGATGCCGGCGTCCAGGCAGGTCTCCAGCACCGGTTCGAGAAAGTCGAACAAGCGC AGGGCGTAGCCGCTCTGGGCATCGTTGAGGCGGCGTAGCTGGGCTTCGGCCAGGGTGCGCTCGGCCAGCAGTTCGAAGAACAGGAAGCGTCGGCCGTTGC GACCGGCGAGGTCGTTGGCCAGCGCCAGCGCGGCATCGGGGCGATCATTGGCGAAGCCCGCGCCGCATCCGATATGGACTGTTGTGGTCATTGTCGATCC ATTCACGGTCAGGTATGCAGCCAGGGTGATGCCTGTGGATTTAGTTGTGAATTCGAAATGTGATATGAATTGATAAGGGAATTTTATAAGTTGCCGAGCC
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| DNA Sequence for Gene |
>PSTAA_3401
ATGGACATCAGCTTTCGCCAGCTTCAGGCCTTCGTCCTGATTGCCGAACACCGCAGTTTCAGTCGCGCCGCCGAGCAGGTTCACCTGTCGCAGCCGGCAC TCAGCTACAGCCTGCGCAAACTCGAAGACGCCCTCGGCTTGTCGCTGCTGGCGCGCAACACGCGCAGCGTGGAGCTGACCGCCGCCGGCCTGCGTTTTCT CGAGCAGGCTCGCCGCCTGCTGCGTGACATGGACAACGCCGTGCACGACGCGCATGAGCAACTGCATCTGGAGAGTGGTTCGCTGCGCATCGCTGTGTTG CCGTCGGTGGCCATCGAGCCCCTGCCACGGGTGCTGCAGGAATACCGGCGGCGCTATCCCGGTATCGACATCAGCCTGCATGACGGCCGCGCCGGGGAAA TCCGCCAGTGGGTGAGTGCGGCCGAGGTGGATTTCGCCATCACCTCGGCGGTCGATGACCTCGGCGCGCTGGATTTCCAGCCGCTGTACGACGACAGCCT GGTATTGCTGGTACGCGGCCACGAACGCCTGCGCGGCAAGGCTTTGCTCGCTGCGCTACGTGAACAGGACTACATCGCCACCACCCGCGATACCAGCCTG CGCAGCATGGCCGATGAAACACTGCAGCGCATGGGGCTGTTGCGTGAACCAGCGTGGGAAGTGGCGTACATGAGCAGCGCCGCCGCGCTGGCGCGTGCGG GCTTGGGCTTCGCCCTGTTGCCGGCCAGCGTGGCCGACACCTTCAACAGCGACGGCAGCCTCGCCGTGCACCAGCTCGACGAGGCGCCGGCGCGCAGCAT CGGCCTGCTGCAGCGCAAGCCGTGCTACCTGAGCCCGCCGGCGCAGGTCTTCGTCGCGCTGTTGCAACAGCAGGTCGGTGGGGCTCTCGGCACGACTACC GAGTCACGCGACGATTTCGCCTCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ATCGATCGTGCTGGATCGCTCGGGTAGAGCGCCAATGTGCGCCTGGCGCCATGCCGGCGGCGCCCGCGCCGTCACGCTCCGGGTCGGCCTCGCCGCGCCG TCGGGCTGAGGAGCCGCTTTTGCGCGAGGCGGGCGATACCTCGGTGAACGGTTTGCCGGCGCCCACCCTGATGGGCTTGCGCGGGCATCCGCCGGGCAGC CTGCAGCTGCTCCTTCCCGCCCCGTCCATTTCACGCGACAATCCGCCCACACAGGCGCCCTGTCAGAGGCGCTCGGCAGCCGTGAGGATTTCCTATGAGC AGCAACGATCGCGTCATCATCTTCGACACCACCCTGCGCGACGGCGAGCAGAGCCCCGGCGCGTCCATGACCGGTGAGGAAAAGCTGCGCATCGCCCGGG CGCTGGAGCGGCTGAAGGTGGACGTGATCGAGGCGGGCTTCGCCATCGCCAGCCCCGGCGATTTCGCCGCGGTGAAGCTGGTCGCCGACAACATCAAGGA
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| Amino Acid Sequence |
>LysR family transcriptional regulator
MDISFRQLQAFVLIAEHRSFSRAAEQVHLSQPALSYSLRKLEDALGLSLLARNTRSVELTAAGLRFLEQARRLLRDMDNAVHDAHEQLHLESGSLRIAVL PSVAIEPLPRVLQEYRRRYPGIDISLHDGRAGEIRQWVSAAEVDFAITSAVDDLGALDFQPLYDDSLVLLVRGHERLRGKALLAALREQDYIATTRDTSL RSMADETLQRMGLLREPAWEVAYMSSAAALARAGLGFALLPASVADTFNSDGSLAVHQLDEAPARSIGLLQRKPCYLSPPAQVFVALLQQQVGGALGTTT ESRDDFAS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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