Strain | Pseudomonas stutzeri DSM 4166 chromosome, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
GCTGGACGTCAACTTCGAGTACGTCAACTCGGAGGTGAACCCGGCGCTGGCCAACATCGTCAGCCCCAGCGAGGTGGTGGTGGTGTCCACCTTCCACATC GAGCTGGACAGTGGCGGCGGTGATCTGCACGTGACCATGCCCTATTCGATGATCGAGCCGATCCGCGAGATGCTCGATGCCGGTTTCCAGTCCGATGTCA GCGACCAGGACGAGCGCTGGGTCAAGGCTCTGCGCGAGGACATCCTGGACGTCAATGTTCCGCTGGGCGCGACGGTTGTGCGCCGCCAGCTCAAGCTGCG CGACATTCTCAACATGCAGCCCGGCGATGTGATTCCCGTGGAAATGCCGGAAGACATGATCATGCGCGCCAATGGCATGCCGGCCTTCAAGGTCAAGCTG GGTGCCCACAAGGGCAACCTGGCATTGCAGGTGCTGGAACCCGTGGTTCGCCCACGCTGAACCAGCCCTTTACTCAATTCGAGCCGATCGAGGATTAGCG
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DNA Sequence for Gene |
>PSTAA_2689
|fliN-2
ATGGCAGACGAACGCGACACTACATCTCCCGAGGAGCAGGCGCTGGCCGACGAGTGGGCCGCGGCCCTGGCCGAGGCGGGCGATGCCTCCCAGGACGATA TCGATGCGCTGCTGAACCAGGGGCCGACAGCGGCGGCGCCCGCCGCACCCGCGGCGCCGCGCGCGCCGCTGGAGGATTTCGCCAGTGCGCCGAAATCCAA TGGTATGCAGCTGGGGCTGGACGGCCCGAACCTGGACGTCATCCTCGACATTCCCGTATCGATTTCGATGGAGGTCGGCAGTACCGAGATCAGCATCCGC AATCTGCTGCAGCTCAATCAGGGCTCGGTGGTGGAGCTCGATCGACTGGCCGGCGAGCCGCTGGACGTACTGGTCAATGGGACGCTGATCGCCCACGGCG AAGTGGTGGTGGTCAACGAGAAGTTCGGTATCCGGCTGACCGATGTGATCAGCCCCACCGAACGCATCAAGAAGTTGCGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CATGCGTGGCCTGGCAATTCTGGCCGCGCTCGTGGCGCTTCCGGTGTGGGCGGCGGAGCCGGCAACGAGCATGAGCAGCGCGGGCATGGGTGCGCAGCTG AGCAAGCTGTTGCTCGGCCTGCTGCTGGTGATCGGTCTGATCTTCCTGCTGGCCTGGCTGCTGCGCCGTGTACAGCAGCTCAATCCGCGTGGCGCCCAGG TGATCAAGCTGGTCTCCAGTCAGGCGCTGGGGCCGCGTGAGCGGCTGGTGCTGGTGCAGGTCGGTGGTGAGCAGATTCTCGTCGGCCTGAGTGGCGGGCG CATCACGCCGCTGCATGTGATGCGCGAGCCGGTGCACCTGCCGGATGCCGAGCCGGCCAACCCTGAATTCGCCCAGCGTCTGATGGAGCTGCTCGGCAAG GATCACAAGGATAAGCCTTGATGTTGCGCATTCTGCTGCTGGCCACGCTGATGCTGGTCGGCCCTCTGGCCATGGCGCAGGAGCCTTCCGGCATCCTGGC
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Amino Acid Sequence |
>flagellar motor switch protein
MADERDTTSPEEQALADEWAAALAEAGDASQDDIDALLNQGPTAAAPAAPAAPRAPLEDFASAPKSNGMQLGLDGPNLDVILDIPVSISMEVGSTEISIR NLLQLNQGSVVELDRLAGEPLDVLVNGTLIAHGEVVVVNEKFGIRLTDVISPTERIKKLR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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