Strain | Pseudomonas stutzeri DSM 4166 chromosome, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
TCGCGACATGCTGGTGTTCGCCCGGGGCGATCTGCCGCTGAACGACCGCGTGACCCCGGCCGAGCTGCTGTCCGCTCTTCGCGCGGCGGCGGAGCCGAAA CTGAGGGATGTCGCCGTGCGCTGGCAGAACGATGCGCAAGGCGGCGAGCTTCTTTGCAACCGCGACACACTGGTCGGCGCGCTGCTCAACCTTGTCGAGA ACGCCTTGCAGGCCTGCAGTGGCGCATGTCGTTTGAAGATTCATCTGTATCGGCGTGATGCCACGCTGCACCTGTGCATCAGCGATAACGGCCGCGGCAT AGAGGCTGGCATCCTGGGGCGGTTGGGCGAGCCGTTCTTCACTACCCGGGACAATGGAACCGGCCTCGGGCTTGCGGTCGCGAAGGCTGTCGCCCGTGCC CATCAAGGCGAGCTGCGCCTGCTTTCCCGGCCAGGTCGCGGCACTTGCGTCATCGTTGCGTTGCCGTTGATTCCTATCGTTCAGAGGGTCGTGTGAGCTG
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DNA Sequence for Gene |
>PSTAA_2651
|fleR
ATGGCTGCGAAAGTACTGCTGGTCGAAGACGACCCATCCCTGCGAGAAGCACTGGGTATCACGCTCGAACTGGGCGGCTATGCACATCGAGCCGTCGACT GCGGCGAAGCCGCACTCATCGCACTGGAGCAGGAGCCTTTTGGTCTGGTCATCAGCGACGTGAACATGCCGGGTATGGATGGCCATGAGCTGCTAGCCTC GATTCGCAAACGTTATCCGCAGATTCCGGTGCTGCTGATGACGGCCTTTGGCGCCGTGGCGAAGGCGGTGGAGGCGATGCGTCAGGGGGCGGTCGATTAC CTCGTCAAGCCTTTCGAGCCCGGCACGCTGCTCGAACTGCTGGGTCGCCACGTCAACGGCGCCCTCGGTCCGCTGGAGGCACAGGGTCCGGTCGCCTGCG AGCCGTCCAGCCAGCGGCTGCTGGATCTTGCTGCGCGCGTGGCGCAAAGCGACTCGACGGTGCTCATCTCCGGCGAATCGGGTACCGGCAAGGAAGTGCT GGCACGTTATATCCACCAGCGCTCGCCGCGTGGTGCAAAGCCGTTCATCGCCATCAACTGCGCCGCTATTCCGGACAACATGCTGGAGGCGACGCTGTTC GGTCACGAAAAGGGCGCCTTCACCGGGGCCATCGCCAGTCAGCCTGGCAAGTTCGAGCAGGCCGATGGCGGTACGCTGCTGCTCGACGAGATTTCCGAGA TGCCGCTCGCGCTGCAGGCCAAGCTGTTGCGGGTGCTGCAGGAGCGCGAGGTGGAGCGGGTTGGCGGGCGAAGGTCGATTGCCCTGGATATCCGGGTGCT TGCGACCACCAACCGCGATCTGGCCGCTGAGGTGGCAGCCGGGCGCTTCCGCGAAGACCTGTTCTATCGATTGTCCGTTTTTCCCCTGGCCTGGCCGCCG CTGCGCGAGCGTCCGGCCGATATCCTGCCGCTGGCCGAGCGCCTGCTGGCGGGCCATGCCCGAAAGATGCGACAGGTACCGGCTCGGTTGTCGTCGGCGG CGCAACGCTGCCTGCTCGAACACGGCTGGCCGGGTAACGTGCGTGAACTGGACAATGCCATTCAGCGTGCGCTGATCCTTCAGCAGGGTGGTGTCATTCA TCCCGAAGATCTCTGCCTGCTCGGCTCTGCTCGTGCTGTCGGTGCGCCGCTTGCCAGTAATCCAGCGCCACTGCCGAGTGAGGCCTCTGCCGCTGTTGGC GAAGTCGGTTCCGCTTTGGGTGATGATCTGCGGCGGCGCGAATTCCAGTTGATCATCGACACGCTGCGCGCCGAACGCGGGCGTCGTAAGGAGACCGCCG ACCGGCTGGGCATCAGTGCGCGAACTTTGCGCTACAAGCTGGCACAGATGCGCGACGCCGGGGTCGATGTGGAAGCGTTGCTATACGCCAGCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCCGGGGTCGCAATGGCTCTGCTAAGCTGCGGCTTTCATGCAGCGGAGGCGCGCAGGTGCACCAGAACTTCTGGCAAGAACGTTGGGCTCGCAACGAAAT CGGTTTTCACCTCGAAGACGTGCATCCTGGCTTGCGCCGTCACTGGCCGCGGCTGGCTTTGCCCGAGGATGCAGCTGTGCTGGTGCCGCTGTGTGGCAAG AGCCTGGACCTGGCCTGGCTCGCAGGGCAGGGCCATCGCGTACTGGGGGTGGAGCTGAGCCAGAAAGCCGTCGAGGCGTTTTTCGCCGAGCAAGGACTGG AGGCGGAGATTTCGCAGGTCGGCGCATTCAAAGTCTATCGATCCGGCAGGCTTGAGATCCGTTGTGGCGATTTCTTTGCGCTGGCGGCGCCAGACGTTGC CGACTGCCGGGGCGTCTACGATCGCGCCGCGCTGATTGCGCTGCCGCCGGCGATGCGCCAGCGCTACGCCGCGTTGCTGACGAACATTCTGCCGGCCGGC
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Amino Acid Sequence |
>sigma-54 dependent transcriptional regulator/response regulator FleR
MAAKVLLVEDDPSLREALGITLELGGYAHRAVDCGEAALIALEQEPFGLVISDVNMPGMDGHELLASIRKRYPQIPVLLMTAFGAVAKAVEAMRQGAVDY LVKPFEPGTLLELLGRHVNGALGPLEAQGPVACEPSSQRLLDLAARVAQSDSTVLISGESGTGKEVLARYIHQRSPRGAKPFIAINCAAIPDNMLEATLF GHEKGAFTGAIASQPGKFEQADGGTLLLDEISEMPLALQAKLLRVLQEREVERVGGRRSIALDIRVLATTNRDLAAEVAAGRFREDLFYRLSVFPLAWPP LRERPADILPLAERLLAGHARKMRQVPARLSSAAQRCLLEHGWPGNVRELDNAIQRALILQQGGVIHPEDLCLLGSARAVGAPLASNPAPLPSEASAAVG EVGSALGDDLRRREFQLIIDTLRAERGRRKETADRLGISARTLRYKLAQMRDAGVDVEALLYAS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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