Pseudomonas stutzeri DSM 4166, PSTAA_2614 (ihfB)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas stutzeri DSM 4166 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GAAGGCCGCGCCCGCTGCCGTACGCCGCTTGGAGCGCGTGACGGCATCGCTGCCCGCAACCTGCTCGGCGCCATACTCAACGAAGGCGGCCTGGCCCGCG AAGCCATCGGCCGCATCCAGGTGCGCGACAGCTTCAGCCTGGTCGAGCTGCCGGAAGACGGCCTTGACCGCCTGCTCGGCAAACTCAAGGACACCCGCGT GGGCGGCAAGCAGCTCAAGCTGCGCCGTTATCGCGAAGACTGATTTGCAGTAGGCAAAACGAAAGGCGGGCTCTAGAGCCCGCCTTTTTTATTCCCTGAA AAAAGATCTGGCAGCAATCTGCCTCCGACCGGCGCCGCCGATGAGCGGGCGGGTGAGCCAAATTTCCGATCTGTGTCACGGTCTCCTAAACCAAGCACTC ATTCGTCGTCAATCCCGTTCGGGCTGTTCAAACTCTGAACAACATGCTACAAACGAACGCAACCCGAATGATCTAGCCGCTTGAAAACGAAGGGAAAACC
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| DNA Sequence for Gene |
>PSTAA_2614
|ihfB
ATGACCAAGTCGGAGTTGATCGAGCGAATCGTCACCCAGCAGGGGCTGCTTTCATCCAAGGATGTCGAGCTGGCCATCAAGACCATGCTTGAGCAAATGG CTCAGGCCTTGGCCACTGGCGAGAGGATCGAGATCCGCGGCTTCGGCAGTTTCTCCCTGCACTACCGCGCCCCCCGCGTCGGTCGTAACCCCAAGACCGG CCAATCCGTCAGCCTCGACGGCAAGTTCGTTCCGCATTTCAAGCCGGGGAAGGAGTTGCGGGATCGGGTGAACGACGACTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TTCTGAATAGCTGTCGCAAGGATCATTGAATACTCTAATGTTTAGGGCATAGTTCTCGGGTTGGCGCATCTATAGCGAGATGAGCAGTTGGCTCGTTGCC CGCGAATAGATCTCGAACGTGCATTTTCAGTGCCGCGCACCCTCATCCGGCATGCTCAATAGCTGCTTCTCATGGTTCCAGTCGAAGGGCTCGTCGTTCT GTTCGGCTTCGTAGCGGCGTTCTTCGAGTTGCTGGAATACGGCGATTTCCTCGTCCGGCATGAAGTGCAGACAGTCGCCGCCGAAGAACCAGAGCAGGTC GCGCGGGACGAGGTGGGCAATCTGCGGGTAGCGATGGAAGACCTGGCAGATCAGGTCCTGGCCCATGTGACGCTCTTCCGGCACGTTTTGCAGGTTCATG ATCAGTTCGTCGAAGCGTTCGAGGAACAGCGCGTGGCTTTCTTCCGAAACCTGTTCGGCTTCGCCCATGGCAAGCAGGATGCCGCGCAGATGGGCCAGCA
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| Amino Acid Sequence |
>integration host factor subunit beta
MTKSELIERIVTQQGLLSSKDVELAIKTMLEQMAQALATGERIEIRGFGSFSLHYRAPRVGRNPKTGQSVSLDGKFVPHFKPGKELRDRVNDD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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