Pseudomonas stutzeri DSM 4166, PSTAA_2569
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:0009190 | cyclic nucleotide biosynthetic process |
Inferred from Sequence Model
Term mapped from: InterPro:PF00211
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
| Biological Process | GO:0035556 | intracellular signal transduction |
Inferred from Sequence Model
Term mapped from: InterPro:PF00211
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
|
|
Pathways
| Database | Xref | Pathway | Version | Evidence | PMID |
|---|---|---|---|---|---|
| KEGG | psr02025 | Biofilm formation - Pseudomonas aeruginosa | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
|
| KEGG | psr00230 | Purine metabolism | 81.0+/01-23, Jan 17 |
ECO:0000249
sequence similarity evidence used in automatic assertion |
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| SMART | SM00044 | cyc_6 | IPR001054 | Adenylyl cyclase class-3/4/guanylyl cyclase | 187 | 397 | 3.4E-35 |
| Gene3D | G3DSA:3.30.70.1230 | Nucleotide cyclase | IPR029787 | Nucleotide cyclase | 218 | 415 | 3.2E-68 |
| Pfam | PF00211 | Adenylate and Guanylate cyclase catalytic domain | IPR001054 | Adenylyl cyclase class-3/4/guanylyl cyclase | 224 | 407 | 7.7E-38 |
| PANTHER | PTHR43081 | ADENYLATE CYCLASE, TERMINAL-DIFFERENTIATION SPECIFIC-RELATED | - | - | 135 | 406 | 4.0E-43 |
| Pfam | PF05230 | MASE2 domain | IPR007894 | MASE2 | 18 | 107 | 2.8E-29 |
| Coils | Coil | Coil | - | - | 439 | 459 | - |
| Coils | Coil | Coil | - | - | 178 | 198 | - |
| CDD | cd07302 | CHD | IPR001054 | Adenylyl cyclase class-3/4/guanylyl cyclase | 226 | 407 | 9.54791E-60 |
| FunFam | G3DSA:3.30.70.1230:FF:000025 | Adenylate cyclase 1 | - | - | 218 | 415 | 2.5E-127 |
| SUPERFAMILY | SSF55073 | Nucleotide cyclase | IPR029787 | Nucleotide cyclase | 220 | 408 | 3.92E-61 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.